RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA312615", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA312615 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27579716 27579716 PRJNA312615_P_NODE_28484_length_229_cov_1.694444_g28333_i0 PRJNA312615 28484 229 1.694444 3.88027676 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.1 1.85e-7   NR MDR3582048.1 2053589 g28333 i0 43.3 0.877729257641921 67 38 87.8 0 23 223 47 113 MDR3582048.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 201 55.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29505707 29505707 PRJNA312615_P_NODE_54490_length_165_cov_0.879310_g54339_i0 PRJNA312615 54490 165 0.87931 1.4508615 Minisyncoccota bacterium 2053589 Bacteria Bacteria 99 8.03e-26   NR MBP9839972.1 2053589 g54339 i0 88 0.909090909090909 50 6 90.9 0 151 2 4 53 MBP9839972.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 150 99 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32760892 32760892 PRJNA312615_P_NODE_14660_length_321_cov_1.062500_g14509_i0 PRJNA312615 14660 321 1.0625 3.410625 Minisyncoccota bacterium 2053589 Bacteria Bacteria 61.2 2.83e-8   NR MDR3582082.1 2053589 g14509 i0 44.1 1.55140186915888 59 33 55.1 0 2 178 302 360 MDR3582082.1 EF-hand domain-containing protein [Candidatus Paceibacterota bacterium] diamond 498 61.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;