RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312615", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA312615 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30516575 30516575 PRJNA312615_P_NODE_28353_length_230_cov_1.088398_g28202_i0 PRJNA312615 28353 230 1.088398 2.5033154 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 43.9 0.0118   NR MEK7400269.1 2026781 g28202 i0 31.7 0.821739130434783 63 41 79.6 1 184 2 189 251 MEK7400269.1 tetratricopeptide repeat protein [Candidatus Poribacteria bacterium] diamond 189 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31830041 31830041 PRJNA312615_P_NODE_10277_length_387_cov_1.204142_g10127_i0 PRJNA312615 10277 387 1.204142 4.66002954 root 1 Root_unresolved Root_unresolved 48.5 3.4e-4   NR MBM3242146.1 2026781 g10127 i0 32.2 2.70542635658915 90 60 69.8 1 386 117 20 108 MBM3242146.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 1047 48.9 0.991820040899796 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;