RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA312615" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 6 ✖

bioproject 1

  • PRJNA312615 · 6 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13132068 13132068 PRJNA312615_P_NODE_39691_length_195_cov_0.945205_g39540_i0 PRJNA312615 39691 195 0.945205 1.84314975 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 67 5.35e-11   NR XP_013761457.1 461836 g39540 i0 49.2 2.83076923076923 63 31 96.9 1 2 190 596 657 XP_013761457.1 uncharacterized protein AMSG_01959 [Thecamonas trahens ATCC 50062] diamond 552 67 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23330878 23330878 PRJNA312615_P_NODE_8979_length_411_cov_4.651934_g8829_i0 PRJNA312615 8979 411 4.651934 19.11944874 Thecamonas trahens 529818 Root_unresolved Root_unresolved 207 7.96e-49   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g8829 i0 77.32 54.4184914841849 388 64 91 14 1 373 165 543 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 22366 207 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24604030 24604030 PRJNA312615_P_NODE_21380_length_263_cov_5.471963_g21229_i0 PRJNA312615 21380 263 5.471963 14.39126269 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 125 9.82e-33   NR XP_013760592.1 461836 g21229 i0 67.8 0.992395437262357 87 26 99.2 1 2 262 192 276 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 261 125 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29789814 29789814 PRJNA312615_P_NODE_5531_length_515_cov_1.744635_g5383_i0 PRJNA312615 5531 515 1.744635 8.98487025 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 67.4 9.09e-10   NR XP_013753393.1 461836 g5383 i0 29.3 0.87378640776699 150 89 78.1 4 16 417 71 219 XP_013753393.1 uncharacterized protein AMSG_10185 [Thecamonas trahens ATCC 50062] diamond 450 67.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29884883 29884883 PRJNA312615_P_NODE_2211_length_748_cov_4.469242_g2089_i0 PRJNA312615 2211 748 4.469242 33.42993016 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 87.8 8.5e-16   NR XP_013758183.1 461836 g2089 i0 31 0.906417112299465 226 130 89.8 4 715 44 150 351 XP_013758183.1 cystatin-A2 [Thecamonas trahens ATCC 50062] diamond 678 87.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31260923 31260923 PRJNA312615_P_NODE_16295_length_304_cov_1.992157_g16144_i0 PRJNA312615 16295 304 1.992157 6.05615728 root 1 Root_unresolved Root_unresolved 128 1.9e-35   NR XP_013759960.1 461836 g16144 i0 66.3 5.08223684210526 89 30 87.8 0 37 303 21 109 XP_013759960.1 40S ribosomal protein S12 [Thecamonas trahens ATCC 50062] diamond 1545 128 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;