RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312107" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA312107 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26979290 26979290 PRJNA312107_P_NODE_21602_length_166_cov_0.888889_g21436_i0 PRJNA312107 21602 166 0.888889 1.47555574 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 42.4 0.0184   NR HMA79839.1 2838779 g21436 i0 34.5 1.04819277108434 58 34 97.6 1 1 162 304 361 HMA79839.1 thiamine pyrophosphate-binding protein [Candidatus Binatia bacterium] diamond 174 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27074224 27074224 PRJNA312107_P_NODE_21022_length_167_cov_0.881356_g20856_i0 PRJNA312107 21022 167 0.881356 1.47186452 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 60.5 6.93e-9   NR MCK6555365.1 2838779 g20856 i0 85.7 1.40119760479042 35 5 62.9 0 107 3 7 41 MCK6555365.1 mevalonate kinase [Candidatus Binatia bacterium] diamond 234 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;