RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA312107", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA312107 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2338874 2338874 PRJNA312107_P_NODE_8402_length_247_cov_1.035354_g8236_i0 PRJNA312107 8402 247 1.035354 2.55732438 Ceratonova 1524939 Cnidaria other_Eukaryota 117 7.810000000000001e-22   NTclustered gi|237512525|gb|FJ981818.1| 60662 g8236 i0 82.963 5.80161943319838 135 18 54 5 31 164 1920 2050 Ceratomyxa shasta 28S large subunit ribosomal RNA gene, partial sequence blastn 1433 117 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratonova Ceratonova shasta
18229238 18229238 PRJNA312107_P_NODE_12255_length_208_cov_1.125786_g12089_i0 PRJNA312107 12255 208 1.125786 2.34163488 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 54.7 0.005   NTclustered gi|2518990885|ref|XM_057446285.1| 13093 g12089 i0 96.97 0.317307692307692 33 0 15 1 105 136 227 195 PREDICTED: Hydractinia symbiolongicarpus putative neuropeptide Y receptor type 6 (LOC130636537), transcript variant X1, mRNA blastn 66 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
23329719 23329719 PRJNA312107_P_NODE_5119_length_312_cov_3.589354_g4953_i0 PRJNA312107 5119 312 3.589354 11.19878448 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 52.8 0.029   NTclustered gi|1603825712|ref|XM_028561550.1| 151771 g4953 i0 94.118 0.108974358974359 34 2 11 0 102 135 722 755 PREDICTED: Dendronephthya gigantea caspase-9-like (LOC114541744), mRNA blastn 34 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
27643116 27643116 PRJNA312107_P_NODE_24464_length_163_cov_0.912281_g24298_i0 PRJNA312107 24464 163 0.912281 1.48701803 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 47 3.67e-4   NR XP_027036686.1 46731 g24298 i0 46.2 3.86503067484663 52 28 95.7 0 156 1 82 133 XP_027036686.1 uncharacterized protein LOC113665218 [Pocillopora damicornis] diamond 630 47 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;