RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA312107", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA312107 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15680329 15680329 PRJNA312107_P_NODE_18593_length_169_cov_0.916667_g18427_i0 PRJNA312107 18593 169 0.916667 1.54916723 uncultured Mycoplasmatota bacterium 658143 Bacteria Bacteria 130 6.34e-26   NTclustered gi|2187163482|emb|OV788640.1| 658143 g18427 i0 80.952 4.8284023668639096 168 29 99 3 3 169 373657 373492 uncultured Tenericutes bacterium isolate min17_bin11 genome assembly, chromosome: 1 blastn 816 130 1 Bacteria   Bacillati Mycoplasmatota         uncultured Mycoplasmatota bacterium
27313303 27313303 PRJNA312107_P_NODE_20083_length_168_cov_0.873950_g19917_i0 PRJNA312107 20083 168 0.87395 1.468236 FCB group 1783270 Bacteria Bacteria 44.7 0.00281   NR MCR5350036.1 2053494 g19917 i0 54.5 1.30357142857143 33 15 58.9 0 101 3 451 483 MCR5350036.1 leucine-rich repeat protein [Acholeplasmatales bacterium] diamond 219 45.1 0.991130820399113 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;