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contig_metadata

9 rows where bioproject = "PRJNA312107", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 9 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 9 ✖

bioproject 1

  • PRJNA312107 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26694324 26694324 PRJNA312107_P_NODE_23201_length_165_cov_0.896552_g23035_i0 PRJNA312107 23201 165 0.896552 1.4793108 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 91.7 4.1800000000000003e-22   NR MCG3176933.1 2035772 g23035 i0 75.5 0.963636363636364 53 13 96.4 0 161 3 21 73 MCG3176933.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 159 91.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28842594 28842594 PRJNA312107_P_NODE_24148_length_164_cov_0.904348_g23982_i0 PRJNA312107 24148 164 0.904348 1.48313072 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.7 0.00272   NR MDP2929707.1 2035772 g23982 i0 38.9 0.98780487804878 54 33 98.8 0 163 2 2751 2804 MDP2929707.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 162 44.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29284593 29284593 PRJNA312107_P_NODE_24029_length_164_cov_0.904348_g23863_i0 PRJNA312107 24029 164 0.904348 1.48313072 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 50.4 1.58e-5   NR MCM8776127.1 2035772 g23863 i0 85.2 1.97560975609756 27 4 49.4 0 82 162 101 127 MCM8776127.1 response regulator [Candidatus Omnitrophota bacterium] diamond 324 50.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30769434 30769434 PRJNA312107_P_NODE_22154_length_166_cov_0.888889_g21988_i0 PRJNA312107 22154 166 0.888889 1.47555574 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 97.4 7.09e-22   NR MDE1920328.1 2035772 g21988 i0 81.5 2.90963855421687 54 10 97.6 0 2 163 214 267 MDE1920328.1 2-oxoacid:acceptor oxidoreductase family protein [Candidatus Omnitrophota bacterium] diamond 483 97.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31685998 31685998 PRJNA312107_P_NODE_19177_length_169_cov_0.866667_g19011_i0 PRJNA312107 19177 169 0.866667 1.46466723 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 100 6.72e-23   NR MCX5679887.1 2035772 g19011 i0 78.2 0.976331360946746 55 12 97.6 0 3 167 388 442 MCX5679887.1 tetratricopeptide repeat protein [Candidatus Omnitrophota bacterium] diamond 165 100 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32224071 32224071 PRJNA312107_P_NODE_24798_length_163_cov_0.912281_g24632_i0 PRJNA312107 24798 163 0.912281 1.48701803 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 54.3 1.05e-6   NR MBN2453275.1 2035772 g24632 i0 59 0.717791411042945 39 16 71.8 0 4 120 28 66 MBN2453275.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 117 54.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32634709 32634709 PRJNA312107_P_NODE_21620_length_166_cov_0.888889_g21454_i0 PRJNA312107 21620 166 0.888889 1.47555574 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 67.8 1.55e-11   NR MBF0486263.1 2035772 g21454 i0 59.3 0.975903614457831 54 22 97.6 0 3 164 132 185 MBF0486263.1 N-acetylmuramoyl-L-alanine amidase [Candidatus Omnitrophota bacterium] diamond 162 67.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32729457 32729457 PRJNA312107_P_NODE_21980_length_166_cov_0.888889_g21814_i0 PRJNA312107 21980 166 0.888889 1.47555574 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 99.4 3.22e-23   NR MDO8730320.1 2035772 g21814 i0 87.3 0.993975903614458 55 7 99.4 0 1 165 3 57 MDO8730320.1 ribose-phosphate pyrophosphokinase [Candidatus Omnitrophota bacterium] diamond 165 99.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32886674 32886674 PRJNA312107_P_NODE_22100_length_166_cov_0.888889_g21934_i0 PRJNA312107 22100 166 0.888889 1.47555574 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.7 0.012   NR MBI4596785.1 2035772 g21934 i0 46.9 0.885542168674699 49 23 86.7 2 149 6 116 162 MBI4596785.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 147 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;