contig_metadata
11 rows where bioproject = "PRJNA312107", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 377581 | 377581 | PRJNA312107_P_NODE_22001_length_166_cov_0.888889_g21835_i0 | PRJNA312107 | 22001 | 166 | 0.888889 | 1.47555574 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 122 | 1.0399999999999997e-23 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g21835 | i0 | 80.723 | 3.00602409638554 | 166 | 24 | 98 | 7 | 2 | 163 | 4991492 | 4991653 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 499 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 11856206 | 11856206 | PRJNA312107_P_NODE_17930_length_172_cov_1.325203_g17764_i0 | PRJNA312107 | 17930 | 172 | 1.325203 | 2.27934916 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 119 | 1.4000000000000002e-22 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g17764 | i0 | 79.775 | 2.44767441860465 | 178 | 24 | 100 | 7 | 1 | 172 | 3055506 | 3055335 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 421 | 119 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 16954911 | 16954911 | PRJNA312107_P_NODE_17214_length_176_cov_1.307087_g17048_i0 | PRJNA312107 | 17214 | 176 | 1.307087 | 2.30047312 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 211 | 2.31e-50 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g17048 | i0 | 89.759 | 105.198863636364 | 166 | 16 | 94 | 1 | 12 | 176 | 232902 | 233067 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 18515 | 211 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 22054152 | 22054152 | PRJNA312107_P_NODE_22878_length_165_cov_0.896552_g22712_i0 | PRJNA312107 | 22878 | 165 | 0.896552 | 1.4793108 | Gemmatimonadetes bacterium 13_2_2 | 1805203 | Bacteria | Bacteria | 102 | 2.8199999999999994e-24 | NR | OLB66937.1 | 1805203 | g22712 | i0 | 90.9 | 5 | 55 | 5 | 100 | 0 | 1 | 165 | 169 | 223 | OLB66937.1 MAG: 6-phosphofructokinase [Gemmatimonadetes bacterium 13_2_20CM_2_66_5] | diamond | 825 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadetes bacterium 13_2_20CM_2_66_5 | |||||
| 24603642 | 24603642 | PRJNA312107_P_NODE_20600_length_167_cov_0.881356_g20434_i0 | PRJNA312107 | 20600 | 167 | 0.881356 | 1.47186452 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 117 | 4.900000000000001e-22 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g20434 | i0 | 80.769 | 15.8562874251497 | 156 | 24 | 92 | 5 | 12 | 164 | 714017 | 714169 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 2648 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 29916454 | 29916454 | PRJNA312107_P_NODE_20691_length_167_cov_0.881356_g20525_i0 | PRJNA312107 | 20691 | 167 | 0.881356 | 1.47186452 | Gemmatimonas sp. | 1962908 | Bacteria | Bacteria | 106 | 1.04e-25 | NR | MEQ1694159.1 | 1962908 | g20525 | i0 | 92.7 | 1.97604790419162 | 55 | 4 | 98.8 | 0 | 165 | 1 | 37 | 91 | MEQ1694159.1 TonB-dependent receptor [Gemmatimonas sp.] | diamond | 330 | 106 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. | |
| 31054007 | 31054007 | PRJNA312107_P_NODE_19015_length_169_cov_0.866667_g18849_i0 | PRJNA312107 | 19015 | 169 | 0.866667 | 1.46466723 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 99 | 1.99e-22 | NR | MBK6842207.1 | 2026742 | g18849 | i0 | 87.5 | 4.97041420118343 | 56 | 7 | 99.4 | 0 | 1 | 168 | 105 | 160 | MBK6842207.1 methylmalonyl-CoA mutase [Gemmatimonadota bacterium] | diamond | 840 | 99 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31496576 | 31496576 | PRJNA312107_P_NODE_21596_length_166_cov_0.888889_g21430_i0 | PRJNA312107 | 21596 | 166 | 0.888889 | 1.47555574 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 87.8 | 5.57e-21 | NR | HET7111693.1 | 2448054 | g21430 | i0 | 73.6 | 1.91566265060241 | 53 | 14 | 95.8 | 0 | 159 | 1 | 1 | 53 | HET7111693.1 DUF4031 domain-containing protein [Gemmatimonadales bacterium] | diamond | 318 | 87.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 31925084 | 31925084 | PRJNA312107_P_NODE_26117_length_162_cov_0.920354_g25951_i0 | PRJNA312107 | 26117 | 162 | 0.920354 | 1.49097348 | Longimicrobium | 1804994 | Bacteria | Bacteria | 39.7 | 0.0454 | NR | WP_170039056.1 | 1639882 | g25951 | i0 | 40.8 | 2.72222222222222 | 49 | 27 | 87 | 1 | 6 | 146 | 27 | 75 | WP_170039056.1 hypothetical protein [Longimicrobium terrae] | diamond | 441 | 39.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium terrae | |
| 32413913 | 32413913 | PRJNA312107_P_NODE_24879_length_163_cov_0.912281_g24713_i0 | PRJNA312107 | 24879 | 163 | 0.912281 | 1.48701803 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 48.5 | 9.08e-6 | NR | MEZ0334830.1 | 2448054 | g24713 | i0 | 68.8 | 0.588957055214724 | 32 | 10 | 58.9 | 0 | 96 | 1 | 1 | 32 | MEZ0334830.1 hypothetical protein [Gemmatimonadales bacterium] | diamond | 96 | 48.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 32746925 | 32746925 | PRJNA312107_P_NODE_19600_length_168_cov_0.873950_g19434_i0 | PRJNA312107 | 19600 | 168 | 0.87395 | 1.468236 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 68.9 | 1.48e-12 | NR | HKV76175.1 | 2448054 | g19434 | i0 | 66.1 | 3.58928571428571 | 56 | 17 | 96.4 | 1 | 2 | 163 | 4 | 59 | HKV76175.1 ECF-type sigma factor [Gemmatimonadales bacterium] | diamond | 603 | 69.3 | 0.994227994227994 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;