RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA312107", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA312107 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27516631 27516631 PRJNA312107_P_NODE_24703_length_163_cov_0.912281_g24537_i0 PRJNA312107 24703 163 0.912281 1.48701803 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 82 9.46e-17   NR HZK76271.1 2447898 g24537 i0 74.1 0.993865030674847 54 14 99.4 0 1 162 141 194 HZK76271.1 DUF6596 domain-containing protein [Candidatus Kapaibacterium sp.] diamond 162 82 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30074109 30074109 PRJNA312107_P_NODE_19952_length_168_cov_0.873950_g19786_i0 PRJNA312107 19952 168 0.87395 1.468236 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 43.9 0.00522   NR HWF44008.1 2447898 g19786 i0 59.4 0.571428571428571 32 13 57.1 0 2 97 458 489 HWF44008.1 glycosyltransferase [Candidatus Kapaibacterium sp.] diamond 96 43.9 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32666395 32666395 PRJNA312107_P_NODE_20080_length_168_cov_0.873950_g19914_i0 PRJNA312107 20080 168 0.87395 1.468236 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 64.7 2.47e-10   NR HEY3875782.1 2447898 g19914 i0 64 0.892857142857143 50 17 89.3 1 153 4 394 442 HEY3875782.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 150 64.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;