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contig_metadata

4 rows where bioproject = "PRJNA312107", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA312107 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24603658 24603658 PRJNA312107_P_NODE_21680_length_166_cov_0.888889_g21514_i0 PRJNA312107 21680 166 0.888889 1.47555574 Pseudomonadati 3379134 Bacteria Bacteria 108 8.75e-26   NR KXJ97888.1 1617425 g21514 i0 98.2 31.8072289156627 55 1 99.4 0 2 166 980 1034 KXJ97888.1 MAG: DNA-directed RNA polymerase subunit beta [Parcubacteria bacterium OLB19] diamond 5280 109 0.990825688073395 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium OLB19
26599111 26599111 PRJNA312107_P_NODE_25401_length_162_cov_1.353982_g25235_i0 PRJNA312107 25401 162 1.353982 2.19345084 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 76.3 1.77e-14   NR MBX4181334.1 2762014 g25235 i0 76.6 2.62962962962963 47 11 87 0 1 141 293 339 MBX4181334.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 426 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27091875 27091875 PRJNA312107_P_NODE_24562_length_163_cov_0.912281_g24396_i0 PRJNA312107 24562 163 0.912281 1.48701803 Bacteria 2 Bacteria Bacteria 73.2 1.9e-13   NR KND50758.1 1659195 g24396 i0 83.8 1.38036809815951 37 6 68.1 0 115 5 1 37 KND50758.1 MAG: Glycosyltransferase [Parcubacteria bacterium C7867-001] diamond 225 73.6 0.994565217391304 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium C7867-001
31559808 31559808 PRJNA312107_P_NODE_17316_length_175_cov_2.253968_g17150_i0 PRJNA312107 17316 175 2.253968 3.944444 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 88.6 2.91e-19   NR MBX4195575.1 2762014 g17150 i0 81 4.97142857142857 58 11 99.4 0 1 174 184 241 MBX4195575.1 ABC transporter permease [Candidatus Parcubacteria bacterium] diamond 870 88.6 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;