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contig_metadata

4 rows where bioproject = "PRJNA312107", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA312107 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23329612 23329612 PRJNA312107_P_NODE_16539_length_180_cov_1.183206_g16373_i0 PRJNA312107 16539 180 1.183206 2.1297708 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 244 2.35e-60   NTclustered gi|2258874820|gb|CP060231.1| 2052152 g16373 i0 91.525 102.883333333333 177 15 98 0 4 180 175541 175365 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-36 chromosome blastn 18519 244 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
27105685 27105685 PRJNA312107_P_NODE_22602_length_165_cov_0.896552_g22436_i0 PRJNA312107 22602 165 0.896552 1.4793108 Candidatus Nomurabacteria bacterium GW2 2052152 Bacteria Bacteria 52 7.23e-6   NR KKS99281.1 1618738 g22436 i0 54.7 0.963636363636364 53 23 96.4 1 159 1 610 661 KKS99281.1 MAG: Adhesin HecA, partial [Candidatus Nomurabacteria bacterium GW2011_GWA2_43_15] diamond 159 52 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWA2_43_15
31116655 31116655 PRJNA312107_P_NODE_25595_length_162_cov_0.920354_g25429_i0 PRJNA312107 25595 162 0.920354 1.49097348 Candidatus Nomurabacteria bacterium RIFCSPLOWO2_ 2052152 Bacteria Bacteria 62.4 1.08e-10   NR OGI94542.1 1801773 g25429 i0 80 0.648148148148148 35 7 64.8 0 3 107 75 109 OGI94542.1 MAG: hypothetical protein A3A03_01600 [Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_18] diamond 105 62.4 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_40_18
31355928 31355928 PRJNA312107_P_NODE_20136_length_168_cov_0.873950_g19970_i0 PRJNA312107 20136 168 0.87395 1.468236 Bacteria 2 Bacteria Bacteria 108 1.58e-26   NR MDB5255203.1 2052152 g19970 i0 94.5 2.94642857142857 55 3 98.2 0 166 2 270 324 MDB5255203.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 495 109 0.990825688073395 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;