contig_metadata
5 rows where bioproject = "PRJNA309466", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11855461 | 11855461 | PRJNA309466_P_NODE_17510_length_163_cov_2.736842_g17453_i0 | PRJNA309466 | 17510 | 163 | 2.736842 | 4.46105246 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 219 | 1.2699999999999999e-52 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g17453 | i0 | 90.854 | 10.8343558282209 | 164 | 13 | 100 | 2 | 1 | 163 | 3942050 | 3942212 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 1766 | 219 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 28102389 | 28102389 | PRJNA309466_P_NODE_7825_length_217_cov_5.732143_g7768_i0 | PRJNA309466 | 7825 | 217 | 5.732143 | 12.43875031 | Bacteria | 2 | Bacteria | Bacteria | 60.5 | 1.5e-8 | NR | RPI55997.1 | 2026735 | g7768 | i0 | 38.8 | 4.65898617511521 | 67 | 39 | 92.6 | 1 | 201 | 1 | 288 | 352 | RPI55997.1 MAG: hypothetical protein EHM49_01210 [Deltaproteobacteria bacterium] | diamond | 1011 | 60.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28765482 | 28765482 | PRJNA309466_P_NODE_18247_length_162_cov_0.920354_g18190_i0 | PRJNA309466 | 18247 | 162 | 0.920354 | 1.49097348 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 43.9 | 0.00477 | NR | NQZ99276.1 | 2026763 | g18190 | i0 | 66.7 | 2.88888888888889 | 30 | 10 | 55.6 | 0 | 160 | 71 | 239 | 268 | NQZ99276.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Myxococcales bacterium] | diamond | 468 | 44.3 | 0.99097065462754 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30579516 | 30579516 | PRJNA309466_P_NODE_17513_length_163_cov_2.675439_g17456_i0 | PRJNA309466 | 17513 | 163 | 2.675439 | 4.36096557 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 90.5 | 1.6e-19 | NR | HQE74717.1 | 2818507 | g17456 | i0 | 77.4 | 3.90184049079755 | 53 | 12 | 97.5 | 0 | 2 | 160 | 133 | 185 | HQE74717.1 DEAD/DEAH box helicase [Myxococcota bacterium] | diamond | 636 | 90.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31370078 | 31370078 | PRJNA309466_P_NODE_11616_length_188_cov_14.956835_g11559_i0 | PRJNA309466 | 11616 | 188 | 14.956835 | 28.1188498 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 43.9 | 0.0071 | NR | HEX6272860.1 | 2268199 | g11559 | i0 | 35.8 | 0.845744680851064 | 53 | 31 | 79.8 | 1 | 11 | 160 | 212 | 264 | HEX6272860.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 159 | 43.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;