RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA309466" and tax_phylum = "Gastrotricha"

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tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA309466 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18228539 18228539 PRJNA309466_P_NODE_19055_length_156_cov_75.523364_g18998_i0 PRJNA309466 19055 156 75.523364 117.81644784 Mesodasys sp. NBP-2014 1562993 Gastrotricha other_Eukaryota 95.3 2.1e-15   NTclustered gi|700212508|gb|KF921011.1| 1562993 g18998 i0 100 32.5512820512821 51 0 33 0 41 91 1693 1743 Mesodasys sp. NBP-2014 isolate OM13-2007 28S ribosomal RNA gene, partial sequence blastn 5078 95.3 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Macrodasyida Lepidodasyidae Mesodasys Mesodasys sp. NBP-2014

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;