RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA309466", tax_clade = "Opisthokonta" and tax_phylum = "Onychophora"

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tax_superkingdom 1

tax_phylum 1

  • Onychophora · 1 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 1 ✖

bioproject 1

  • PRJNA309466 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18914614 18914614 PRJNA309466_P_NODE_9835_length_200_cov_299961.768212_g9778_i0 PRJNA309466 9835 200 299961.768212 599923.536424 Euonychophora 2082882 Onychophora other_Eukaryota 97.1 7.91e-16   NTclustered gi|1487186172|gb|MG973562.1| 1454321 g9778 i0 100 26 52 0 26 0 102 153 1513 1564 Macroperipatus torquatus voucher MCZ:143928 18S small subunit ribosomal RNA gene, partial sequence blastn 5200 97.1 1 Eukaryota Opisthokonta Metazoa Onychophora Udeonychophora Euonychophora Peripatidae Macroperipatus Macroperipatus torquatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;