RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA309466", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA309466 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12541756 12541756 PRJNA309466_P_NODE_9410_length_203_cov_1490586.662338_g9353_i0 PRJNA309466 9410 203 1490586.662338 3025890.92454614 Metazoa 33208 Annelida Annelida 60.2 1.06e-4   NTclustered gi|378463764|gb|JN865049.1| 6446 g9353 i0 94.872 19.2118226600985 39 1 19 1 41 79 1580 1543 Sipunculus nudus voucher MCZ DNA101789 28S ribosomal RNA gene, partial sequence blastn 3900 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Sipuncula Golfingiida Sipunculidae Sipunculus Sipunculus nudus
20778306 20778306 PRJNA309466_P_NODE_12797_length_182_cov_1.541353_g12740_i0 PRJNA309466 12797 182 1.541353 2.80526246 Hirudo verbana 311461 Annelida Annelida 104 4.21e-18   NTclustered gi|2918369697|emb|OZ237786.1| 311461 g12740 i0 81.679 0.71978021978022 131 18 69 4 37 162 11097405 11097534 Hirudo verbana genome assembly, chromosome: 8 blastn 131 104 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
23328826 23328826 PRJNA309466_P_NODE_16499_length_166_cov_1.521368_g16442_i0 PRJNA309466 16499 166 1.521368 2.52547088 Ailoscolex lacteospumosus 1046305 Annelida Annelida 60.2 8.31e-5   NTclustered gi|2920003651|emb|OZ238876.1| 1046305 g16442 i0 97.222 0.216867469879518 36 0 21 1 24 58 14036342 14036377 Ailoscolex lacteospumosus genome assembly, chromosome: 17 blastn 36 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;