RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA309466", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA309466 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29158659 29158659 PRJNA309466_P_NODE_17569_length_163_cov_1.807018_g17512_i0 PRJNA309466 17569 163 1.807018 2.94543934 Minisyncoccota bacterium 2053589 Bacteria Bacteria 102 6.36e-26   NR MBP6948700.1 2053589 g17512 i0 92.5 1.93251533742331 53 4 97.5 0 3 161 120 172 MBP6948700.1 transcription termination/antitermination factor NusG [Candidatus Paceibacterota bacterium] diamond 315 102 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32445672 32445672 PRJNA309466_P_NODE_17299_length_164_cov_0.904348_g17242_i0 PRJNA309466 17299 164 0.904348 1.48313072 Minisyncoccota bacterium 2053589 Bacteria Bacteria 80.1 8.54e-16   NR MFO0718553.1 2053589 g17242 i0 67.9 0.969512195121951 53 17 97 0 162 4 446 498 MFO0718553.1 GspE/PulE family protein [Candidatus Paceibacterota bacterium] diamond 159 80.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;