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contig_metadata

23 rows where bioproject = "PRJNA309466" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 23 ✖

bioproject 1

  • PRJNA309466 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7441132 7441132 PRJNA309466_P_NODE_6966_length_226_cov_1.734463_g6909_i0 PRJNA309466 6966 226 1.734463 3.91988638 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 136 3.56e-36   NR GAB0174460.1 2044595 g6909 i0 91.7 2.86725663716814 72 6 95.6 0 11 226 380 451 GAB0174460.1 MAG: F0F1 ATP synthase subunit beta [Candidatus Altimarinota bacterium] diamond 648 136 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
10580821 10580821 PRJNA309466_P_NODE_5669_length_245_cov_9.469388_g5612_i0 PRJNA309466 5669 245 9.469388 23.2000006 Candidatus Chromulinivorax destructor 2066483 Bacteria Bacteria 217 7.41e-52   NTclustered gi|1443103054|gb|CP025544.1| 2066483 g5612 i0 82.787 4.91428571428571 244 40 99 2 1 243 664459 664701 Candidatus Chromulinivorax destructor strain SeV1 chromosome, complete genome blastn 1204 217 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Chromulinivoraceae Candidatus Chromulinivorax Candidatus Chromulinivorax destructor
11855533 11855533 PRJNA309466_P_NODE_9450_length_203_cov_5.032468_g9393_i0 PRJNA309466 9450 203 5.032468 10.21591004 Candidatus Chromulinivorax destructor 2066483 Bacteria Bacteria 300 5.72e-77   NTclustered gi|1443103054|gb|CP025544.1| 2066483 g9393 i0 93.939 112.133004926108 198 12 98 0 2 199 663721 663918 Candidatus Chromulinivorax destructor strain SeV1 chromosome, complete genome blastn 22763 300 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Chromulinivoraceae Candidatus Chromulinivorax Candidatus Chromulinivorax destructor
15679509 15679509 PRJNA309466_P_NODE_12173_length_185_cov_2.272059_g12116_i0 PRJNA309466 12173 185 2.272059 4.20330915 Candidatus Babela massiliensis 673862 Bacteria Bacteria 327 2.34e-85   NTclustered gi|563405083|emb|HG793133.1| 673862 g12116 i0 99.444 147.043243243243 180 1 97 0 1 180 500198 500377 Candidatus Babela massiliensis strain BABL1 complete genome blastn 27203 327 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae Candidatus Babela Candidatus Babela massiliensis
18228557 18228557 PRJNA309466_P_NODE_5075_length_256_cov_1.975845_g5018_i0 PRJNA309466 5075 256 1.975845 5.0581632 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 125 3.5899999999999995e-32   NR MFA5991257.1 2052150 g5018 i0 80.3 1.78125 76 15 89.1 0 252 25 249 324 MFA5991257.1 trypsin-like peptidase domain-containing protein [Candidatus Doudnabacteria bacterium] diamond 456 125 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
26821249 26821249 PRJNA309466_P_NODE_13481_length_178_cov_3.705426_g13424_i0 PRJNA309466 13481 178 3.705426 6.59565828 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 49.3 7.71e-5   NR MBC7766448.1 2762014 g13424 i0 69.4 0.606741573033708 36 11 60.7 0 8 115 723 758 MBC7766448.1 ATP-dependent DNA helicase RecG [Candidatus Parcubacteria bacterium] diamond 108 49.3 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
26853000 26853000 PRJNA309466_P_NODE_8581_length_210_cov_3.801242_g8524_i0 PRJNA309466 8581 210 3.801242 7.9826082 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 47.4 5.91e-4   NR NRH21421.1 2044595 g8524 i0 82.8 0.828571428571429 29 5 41.4 0 195 109 135 163 NRH21421.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 174 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27168840 27168840 PRJNA309466_P_NODE_15142_length_170_cov_2.867769_g15085_i0 PRJNA309466 15142 170 2.867769 4.8752073 Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_ 2750079 Bacteria Bacteria 55.5 4.48e-7   NR OGZ57538.1 1802157 g15085 i0 47.1 0.9 51 27 90 0 154 2 357 407 OGZ57538.1 MAG: hypothetical protein A2728_00385 [Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_38_11] diamond 153 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Spechtiibacteriota         Candidatus Spechtbacteria bacterium RIFCSPHIGHO2_01_FULL_38_11
27832310 27832310 PRJNA309466_P_NODE_5464_length_249_cov_2.805000_g5407_i0 PRJNA309466 5464 249 2.805 6.98445 Candidatus Daviesbacteria bacterium GW2 2053542 Bacteria Bacteria 112 2.04e-28   NR KKQ15954.1 1618417 g5407 i0 74.3 0.843373493975904 70 18 84.3 0 218 9 47 116 KKQ15954.1 MAG: 50S ribosomal protein L25 [Candidatus Daviesbacteria bacterium GW2011_GWA1_36_8] diamond 210 112 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium GW2011_GWA1_36_8
27863820 27863820 PRJNA309466_P_NODE_12345_length_184_cov_3.533333_g12288_i0 PRJNA309466 12345 184 3.533333 6.50133272 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 62.4 1.96e-9   NR MBI2593738.1 2053542 g12288 i0 58.8 0.831521739130435 51 21 83.2 0 156 4 232 282 MBI2593738.1 Glu/Leu/Phe/Val dehydrogenase [Candidatus Daviesbacteria bacterium] diamond 153 62.4 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
27895415 27895415 PRJNA309466_P_NODE_6505_length_231_cov_6.313187_g6448_i0 PRJNA309466 6505 231 6.313187 14.58346197 Candidatus Staskawiczbacteria bacterium 2053617 Bacteria Bacteria 58.9 4.75e-9   NR MBM3206646.1 2053617 g6448 i0 57.1 2.49350649350649 49 21 63.6 0 4 150 61 109 MBM3206646.1 hypothetical protein [Candidatus Staskawiczbacteria bacterium] diamond 576 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Staskawicziibacteriota         Candidatus Staskawiczbacteria bacterium
27927088 27927088 PRJNA309466_P_NODE_9745_length_201_cov_1.828947_g9688_i0 PRJNA309466 9745 201 1.828947 3.67618347 Patescibacteria group bacterium 2052139 Bacteria Bacteria 72.4 7.59e-13   NR MEK7590800.1 2052139 g9688 i0 68 0.746268656716418 50 16 74.6 0 52 201 208 257 MEK7590800.1 S-layer homology domain-containing protein [Patescibacteria group bacterium] diamond 150 72.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27990338 27990338 PRJNA309466_P_NODE_19465_length_154_cov_2.352381_g19408_i0 PRJNA309466 19465 154 2.352381 3.62266674 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 43.1 0.00818   NR MEY2664238.1 2762014 g19408 i0 51.5 0.642857142857143 33 16 64.3 0 37 135 153 185 MEY2664238.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 99 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29158657 29158657 PRJNA309466_P_NODE_12189_length_185_cov_2.029412_g12132_i0 PRJNA309466 12189 185 2.029412 3.7544122 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 68.9 1e-11   NR MEN9649771.1 2762014 g12132 i0 96.2 0.859459459459459 53 2 85.9 0 161 3 2288 2340 MEN9649771.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 159 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29158659 29158659 PRJNA309466_P_NODE_17569_length_163_cov_1.807018_g17512_i0 PRJNA309466 17569 163 1.807018 2.94543934 Minisyncoccota bacterium 2053589 Bacteria Bacteria 102 6.36e-26   NR MBP6948700.1 2053589 g17512 i0 92.5 1.93251533742331 53 4 97.5 0 3 161 120 172 MBP6948700.1 transcription termination/antitermination factor NusG [Candidatus Paceibacterota bacterium] diamond 315 102 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30232209 30232209 PRJNA309466_P_NODE_17772_length_163_cov_0.912281_g17715_i0 PRJNA309466 17772 163 0.912281 1.48701803 Patescibacteria group bacterium 2052139 Bacteria Bacteria 94 1.15e-20   NR MEK7531048.1 2052139 g17715 i0 85.2 0.993865030674847 54 8 99.4 0 163 2 250 303 MEK7531048.1 type I DNA topoisomerase [Patescibacteria group bacterium] diamond 162 94 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30390632 30390632 PRJNA309466_P_NODE_4093_length_286_cov_6.345992_g4037_i0 PRJNA309466 4093 286 6.345992 18.14953712 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 79.3 8.18e-15   NR MBI3485584.1 2053542 g4037 i0 42.9 2.88461538461538 91 52 95.5 0 275 3 103 193 MBI3485584.1 VanW family protein [Candidatus Daviesbacteria bacterium] diamond 825 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
30895881 30895881 PRJNA309466_P_NODE_8594_length_210_cov_2.521739_g8537_i0 PRJNA309466 8594 210 2.521739 5.2956519 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 55.8 2.37e-7   NR MBC7504097.1 2044595 g8537 i0 63.6 1.32857142857143 44 16 62.9 0 75 206 147 190 MBC7504097.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 279 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31274913 31274913 PRJNA309466_P_NODE_19435_length_154_cov_2.895238_g19378_i0 PRJNA309466 19435 154 2.895238 4.45866652 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 47 3.54e-4   NR MEI6327524.1 2282149 g19378 i0 50 0.896103896103896 46 23 89.6 0 11 148 243 288 MEI6327524.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Candidatus Roizmanbacteria bacterium] diamond 138 47 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
31988355 31988355 PRJNA309466_P_NODE_13318_length_179_cov_2.138462_g13261_i0 PRJNA309466 13318 179 2.138462 3.82784698 Pseudomonadati 3379134 Bacteria Bacteria 60.1 1.19e-8   NR MCA9365522.1 2030810 g13261 i0 54.5 9.31843575418994 44 20 73.7 0 178 47 436 479 MCA9365522.1 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase [Candidatus Kaiserbacteria bacterium] diamond 1668 60.5 0.993388429752066 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
32192394 32192394 PRJNA309466_P_NODE_17018_length_165_cov_0.896552_g16961_i0 PRJNA309466 17018 165 0.896552 1.4793108 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 44.7 0.0027   NR MBP7823327.1 2044595 g16961 i0 60 0.727272727272727 40 15 70.9 1 122 6 29 68 MBP7823327.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 120 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32445672 32445672 PRJNA309466_P_NODE_17299_length_164_cov_0.904348_g17242_i0 PRJNA309466 17299 164 0.904348 1.48313072 Minisyncoccota bacterium 2053589 Bacteria Bacteria 80.1 8.54e-16   NR MFO0718553.1 2053589 g17242 i0 67.9 0.969512195121951 53 17 97 0 162 4 446 498 MFO0718553.1 GspE/PulE family protein [Candidatus Paceibacterota bacterium] diamond 159 80.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32477261 32477261 PRJNA309466_P_NODE_18639_length_159_cov_3.181818_g18582_i0 PRJNA309466 18639 159 3.181818 5.05909062 Patescibacteria group bacterium 2052139 Bacteria Bacteria 43.5 0.00636   NR MBU4421904.1 2052139 g18582 i0 54.5 0.830188679245283 44 19 83 1 152 21 1512 1554 MBU4421904.1 hypothetical protein [Patescibacteria group bacterium] diamond 132 43.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;