RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

33 rows where bioproject = "PRJNA306153" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 33 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA306153 · 33 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
376352 376352 PRJNA306153_S_NODE_1481_length_199_cov_15946.958824_g1468_i0 PRJNA306153 1481 199 15946.958824 31734.44805976 Mytilus edulis 6550 Mollusca Mollusca 268 1.5799999999999998e-67   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g1468 i0 98.684 76.5527638190955 152 1 76 1 49 199 2391 2240 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 15234 268 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
1062310 1062310 PRJNA306153_S_NODE_201_length_464_cov_194.190805_g189_i0 PRJNA306153 201 464 194.190805 901.0453352 Mytilus 6548 Mollusca Mollusca 758 0   NTclustered gi|2912307082|ref|XR_011659443.1| 6550 g189 i0 100 88.4224137931034 410 0 88 0 1 410 401 810 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139504896), rRNA blastn 41028 758 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
2337499 2337499 PRJNA306153_S_NODE_462_length_332_cov_9297.046205_g449_i0 PRJNA306153 462 332 9297.046205 30866.1934006 Mytilidae 6547 Mollusca Mollusca 514 3.32e-141   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g449 i0 100 83.7620481927711 278 0 84 0 55 332 679 402 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 27809 514 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
3612790 3612790 PRJNA306153_S_NODE_343_length_376_cov_8000.193084_g330_i0 PRJNA306153 343 376 8000.1930840000005 30080.72599584 Mytilidae 6547 Mollusca Mollusca 597 3.669999999999999e-166   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g330 i0 100 85.9255319148936 323 0 86 0 54 376 724 402 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 32308 597 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
4203530 4203530 PRJNA306153_S_NODE_1544_length_196_cov_407.778443_g1531_i0 PRJNA306153 1544 196 407.778443 799.24574828 Mytilus edulis 6550 Mollusca Mollusca 263 7.189999999999999e-66   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g1531 i0 100 72.6581632653061 142 0 72 0 55 196 2381 2240 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 14241 263 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
4890167 4890167 PRJNA306153_S_NODE_524_length_317_cov_9402.368056_g511_i0 PRJNA306153 524 317 9402.368056 29805.50673752 Mytilidae 6547 Mollusca Mollusca 488 1.91e-133   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g511 i0 100 83.3154574132492 264 0 83 0 54 317 665 402 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 26411 488 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
7440212 7440212 PRJNA306153_S_NODE_1006_length_237_cov_13322.461538_g993_i0 PRJNA306153 1006 237 13322.461538 31574.23384506 Mytilidae 6547 Mollusca Mollusca 289 1.49e-73   NTclustered gi|2912310740|ref|XR_011661159.1| 6550 g993 i0 95.082 77.253164556962 183 9 77 0 1 183 89 271 PREDICTED: Mytilus edulis small subunit ribosomal RNA (LOC139508379), rRNA blastn 18309 289 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
7440224 7440224 PRJNA306153_S_NODE_386_length_360_cov_8530.673716_g373_i0 PRJNA306153 386 360 8530.673716 30710.4253776 Mytilidae 6547 Mollusca Mollusca 566 9.849999999999999e-157   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g373 i0 100 85.0333333333333 306 0 85 0 55 360 707 402 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 30612 566 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
8714895 8714895 PRJNA306153_S_NODE_207_length_458_cov_6362.627040_g195_i0 PRJNA306153 207 458 6362.62704 29140.8318432 Mytilus 6548 Mollusca Mollusca 701 0   NTclustered gi|2912307082|ref|XR_011659443.1| 6550 g195 i0 100 82.8100436681223 379 0 83 0 1 379 401 779 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139504896), rRNA blastn 37927 701 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
8714902 8714902 PRJNA306153_S_NODE_847_length_259_cov_349.382609_g834_i0 PRJNA306153 847 259 349.382609 904.90095731 Mytilidae 6547 Mollusca Mollusca 379 9.529999999999998e-101   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g834 i0 100 79.1544401544402 205 0 79 0 1 205 402 606 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 20501 379 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
9990404 9990404 PRJNA306153_S_NODE_328_length_381_cov_7834.613636_g315_i0 PRJNA306153 328 381 7834.613636 29849.87795316 Mytilidae 6547 Mollusca Mollusca 606 6.179999999999998e-169   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g315 i0 100 86.1207349081365 328 0 86 0 1 328 402 729 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 32812 606 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
9990408 9990408 PRJNA306153_S_NODE_748_length_275_cov_11452.130081_g735_i0 PRJNA306153 748 275 11452.130081 31493.35772275 Metazoa 33208 Mollusca Mollusca 411 3.619999999999999e-110   NTclustered gi|2334739446|ref|XR_007981269.1| 6549 g735 i0 100 80.7309090909091 222 0 81 0 1 222 70 291 PREDICTED: Mytilus californianus large subunit ribosomal RNA (LOC127699882), rRNA blastn 22201 411 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
10580291 10580291 PRJNA306153_S_NODE_1149_length_223_cov_88.783505_g1136_i0 PRJNA306153 1149 223 88.783505 197.98721615 Mytilus edulis 6550 Mollusca Mollusca 364 2.2399999999999993e-96   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g1136 i0 100 88.5336322869955 197 0 88 0 27 223 2436 2240 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 19743 364 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
11265465 11265465 PRJNA306153_S_NODE_789_length_269_cov_255.433333_g776_i0 PRJNA306153 789 269 255.433333 687.11566577 Mytilidae 6547 Mollusca Mollusca 398 2.7499999999999996e-106   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g776 i0 99.099 80.8252788104089 222 1 83 1 1 222 402 622 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 21742 398 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
11265466 11265466 PRJNA306153_S_NODE_929_length_247_cov_6593.440367_g916_i0 PRJNA306153 929 247 6593.440367 16285.79770649 Mytilidae 6547 Mollusca Mollusca 318 1.9899999999999998e-82   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g916 i0 100 69.6356275303644 172 0 70 0 76 247 573 402 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 17200 318 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
12540764 12540764 PRJNA306153_S_NODE_430_length_346_cov_60.668770_g417_i0 PRJNA306153 430 346 60.66877 209.9139442 Mytilidae 6547 Mollusca Mollusca 592 1.5599999999999996e-164   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g417 i0 100 92.5202312138728 320 0 92 0 1 320 402 721 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 32012 592 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
15089897 15089897 PRJNA306153_S_NODE_1132_length_225_cov_14031.801020_g1119_i0 PRJNA306153 1132 225 14031.80102 31571.552295 Metazoa 33208 Mollusca Mollusca 316 6.429999999999998e-82   NTclustered gi|1008860|gb|L33449.1|MSLSRRNAB 6549 g1119 i0 100 76 171 0 76 0 1 171 837 1007 Mytilus californianus 18S small subunit ribosomal RNA gene, complete sequence blastn 17100 316 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
15089902 15089902 PRJNA306153_S_NODE_872_length_255_cov_12420.026549_g859_i0 PRJNA306153 872 255 12420.026549 31671.06769995 Mytilidae 6547 Mollusca Mollusca 322 1.6e-83   NTclustered gi|2912310740|ref|XR_011661159.1| 6550 g859 i0 95.522 78.8392156862745 201 9 79 0 1 201 89 289 PREDICTED: Mytilus edulis small subunit ribosomal RNA (LOC139508379), rRNA blastn 20104 322 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
15679128 15679128 PRJNA306153_S_NODE_793_length_268_cov_11564.627615_g780_i0 PRJNA306153 793 268 11564.627615 30993.2020082 Mytilus edulis 6550 Mollusca Mollusca 396 9.839999999999996e-106   NTclustered gi|2912307082|ref|XR_011659443.1| 6550 g780 i0 100 80.0149253731343 214 0 80 0 55 268 2456 2243 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139504896), rRNA blastn 21444 396 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
15679129 15679129 PRJNA306153_S_NODE_813_length_264_cov_11802.702128_g800_i0 PRJNA306153 813 264 11802.702128 31159.13361792 Mytilus edulis 6550 Mollusca Mollusca 390 4.5e-104   NTclustered gi|2912307082|ref|XR_011659443.1| 6550 g800 i0 100 80.1060606060606 211 0 80 0 1 211 2243 2453 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139504896), rRNA blastn 21148 390 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
16364752 16364752 PRJNA306153_S_NODE_1653_length_190_cov_17120.018634_g1640_i0 PRJNA306153 1653 190 17120.018634 32528.0354046 Mytilidae 6547 Mollusca Mollusca 254 4.17e-63   NTclustered gi|2573713407|gb|OR512482.1| 6550 g1640 i0 100 72.2947368421053 137 0 72 0 1 137 568 704 Mytilus edulis isolate 57 small subunit ribosomal RNA gene, partial sequence blastn 13736 254 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
16364761 16364761 PRJNA306153_S_NODE_573_length_307_cov_9750.931655_g560_i0 PRJNA306153 573 307 9750.931655 29935.36018085 Mytilidae 6547 Mollusca Mollusca 473 5.159999999999999e-129   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g560 i0 99.615 84.7263843648208 260 0 85 1 1 260 402 660 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 26011 473 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
17639908 17639908 PRJNA306153_S_NODE_494_length_326_cov_9389.771044_g481_i0 PRJNA306153 494 326 9389.771044 30610.65360344 Mytilidae 6547 Mollusca Mollusca 507 5.44e-139   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g481 i0 100 84.0828220858896 274 0 84 0 1 274 402 675 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 27411 507 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
17639911 17639911 PRJNA306153_S_NODE_794_length_268_cov_11155.364017_g781_i0 PRJNA306153 794 268 11155.364017 29896.37556556 Mytilidae 6547 Mollusca Mollusca 398 2.7399999999999997e-106   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g781 i0 99.095 80.0373134328358 221 2 82 0 48 268 622 402 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 21450 398 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
18228045 18228045 PRJNA306153_S_NODE_1635_length_191_cov_424.160494_g1622_i0 PRJNA306153 1635 191 424.16049400000003 810.14654354 Mytilus edulis 6550 Mollusca Mollusca 254 4.2e-63   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g1622 i0 100 71.9424083769634 137 0 72 0 1 137 2240 2376 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 13741 254 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
20188321 20188321 PRJNA306153_S_NODE_1196_length_219_cov_14620.331579_g1183_i0 PRJNA306153 1196 219 14620.331579 32018.52615801 Metazoa 33208 Mollusca Mollusca 307 3.75e-79   NTclustered gi|1008860|gb|L33449.1|MSLSRRNAB 6549 g1183 i0 100 75.7990867579909 166 0 76 0 54 219 1002 837 Mytilus californianus 18S small subunit ribosomal RNA gene, complete sequence blastn 16600 307 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
20188324 20188324 PRJNA306153_S_NODE_1576_length_194_cov_16808.309091_g1563_i0 PRJNA306153 1576 194 16808.309091 32608.11963654 Mytilidae 6547 Mollusca Mollusca 209 9.39e-50   NTclustered gi|109293785|gb|DQ640513.1| 6549 g1563 i0 93.571 72.1701030927835 140 9 72 0 1 140 67 206 Mytilus californianus voucher McalI1 18S ribosomal RNA gene, partial sequence blastn 14001 209 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
22739057 22739057 PRJNA306153_S_NODE_998_length_238_cov_13509.559809_g985_i0 PRJNA306153 998 238 13509.559809 32152.75234542 Mytilidae 6547 Mollusca Mollusca 291 4.16e-74   NTclustered gi|2912310740|ref|XR_011661159.1| 6550 g985 i0 95.109 77.327731092437 184 9 77 0 1 184 89 272 PREDICTED: Mytilus edulis small subunit ribosomal RNA (LOC139508379), rRNA blastn 18404 291 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
24014126 24014126 PRJNA306153_S_NODE_799_length_267_cov_11755.638655_g786_i0 PRJNA306153 799 267 11755.638655 31387.55520885 Mytilidae 6547 Mollusca Mollusca 401 2.1099999999999995e-107   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g786 i0 99.548 81.5505617977528 221 0 82 1 1 220 402 622 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 21774 401 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
24602452 24602452 PRJNA306153_S_NODE_1440_length_201_cov_16334.546512_g1427_i0 PRJNA306153 1440 201 16334.546512 32832.43848912 Mytilus edulis 6550 Mollusca Mollusca 276 9.53e-70   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g1427 i0 99.346 76.3233830845771 153 0 76 1 1 153 2240 2391 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 15341 276 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
24602453 24602453 PRJNA306153_S_NODE_1500_length_198_cov_16688.840237_g1487_i0 PRJNA306153 1500 198 16688.840237 33043.90366926 Mytilus edulis 6550 Mollusca Mollusca 267 5.63e-67   NTclustered gi|2912309460|ref|XR_011660525.1| 6550 g1487 i0 100 72.9343434343434 144 0 73 0 55 198 2383 2240 PREDICTED: Mytilus edulis large subunit ribosomal RNA (LOC139507000), rRNA blastn 14441 267 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
25288367 25288367 PRJNA306153_S_NODE_1520_length_197_cov_392.416667_g1507_i0 PRJNA306153 1520 197 392.416667 773.06083399 Mytilidae 6547 Mollusca Mollusca 265 2.0099999999999997e-66   NTclustered gi|2573713407|gb|OR512482.1| 6550 g1507 i0 100 72.7766497461929 143 0 73 0 55 197 710 568 Mytilus edulis isolate 57 small subunit ribosomal RNA gene, partial sequence blastn 14337 265 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
29127152 29127152 PRJNA306153_S_NODE_1649_length_191_cov_3.277778_g1636_i0 PRJNA306153 1649 191 3.277778 6.26055598 Elysia marginata 1093978 Mollusca Mollusca 107 5.14e-29   NR GFS19501.1 1093978 g1636 i0 77.8 5.93717277486911 54 12 84.8 0 185 24 1 54 GFS19501.1 40S ribosomal protein S29 [Elysia marginata] diamond 1134 107 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia marginata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;