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contig_metadata

21 rows where bioproject = "PRJNA306153" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA306153 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1062311 1062311 PRJNA306153_S_NODE_2201_length_168_cov_7.280576_g2188_i0 PRJNA306153 2201 168 7.280576 12.23136768 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 305 9.81e-79   NTclustered gi|83034975|gb|DQ211604.1| 352465 g2188 i0 100 96.8571428571429 165 0 98 0 1 165 313 477 Bodomorpha sp. HFCC57 28S ribosomal RNA gene, partial sequence blastn 16272 305 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC57
1062320 1062320 PRJNA306153_S_NODE_981_length_242_cov_12.042254_g968_i0 PRJNA306153 981 242 12.042254 29.14225468 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 448 2.3799999999999995e-121   NTclustered gi|2493707699|dbj|LC764482.1| 45107 g968 i0 100 100 242 0 100 0 1 242 744 985 Heteromita globosa LAP3-2017 gene for 18S rRNA, partial sequence blastn 24200 448 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
1651157 1651157 PRJNA306153_S_NODE_482_length_329_cov_6.783333_g469_i0 PRJNA306153 482 329 6.783333 22.31716557 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 608 1.4599999999999995e-169   NTclustered gi|238617630|gb|FJ973394.1| 188950 g469 i0 100 84.048632218845 329 0 100 0 1 329 335 663 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 27652 608 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
1651161 1651161 PRJNA306153_S_NODE_982_length_242_cov_4.539906_g969_i0 PRJNA306153 982 242 4.539906 10.98657252 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 355 1.48e-93   NTclustered gi|300676732|gb|GQ377662.1| 188950 g969 i0 98.99 96.8347107438017 198 2 82 0 45 242 1120 923 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 23434 355 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
3612785 3612785 PRJNA306153_S_NODE_1523_length_197_cov_16.333333_g1510_i0 PRJNA306153 1523 197 16.333333 32.17666601 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 339 1.17e-88   NTclustered gi|219524778|gb|EU709141.1| 175275 g1510 i0 98.429 96.9543147208122 191 3 97 0 1 191 1528 1338 Uncultured cercozoan isolate HetChi37 18S ribosomal RNA gene, partial sequence blastn 19100 342 0.991228070175439 Eukaryota Sar   Cercozoa         uncultured Cercozoa
4203533 4203533 PRJNA306153_S_NODE_2304_length_164_cov_4.429630_g2291_i0 PRJNA306153 2304 164 4.42963 7.2645932 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 303 3.42e-78   NTclustered gi|238617602|gb|FJ973377.1| 188950 g2291 i0 100 99.4939024390244 164 0 100 0 1 164 1014 851 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 16317 303 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4203539 4203539 PRJNA306153_S_NODE_844_length_260_cov_4.554113_g831_i0 PRJNA306153 844 260 4.554113 11.8406938 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 121 1.44e-31   NR MES1907458.1 1215613 g831 i0 70.2 1.95 84 25 96.9 0 4 255 76 159 MES1907458.1 hypothetical protein [Cercozoa sp. M6MM] diamond 507 121 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
5479839 5479839 PRJNA306153_S_NODE_1945_length_178_cov_2.342282_g1932_i0 PRJNA306153 1945 178 2.342282 4.16926196 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 101 1.54e-25   NR AAT09077.1 227086 g1932 i0 84.2 1.93820224719101 57 9 96.1 0 178 8 59 115 AAT09077.1 transcription factor BTF3 [Bigelowiella natans] diamond 345 101 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
5479843 5479843 PRJNA306153_S_NODE_345_length_374_cov_12.591304_g332_i0 PRJNA306153 345 374 12.591304 47.09147696 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 401 3.069999999999999e-107   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g332 i0 86.885 54.2058823529412 366 39 97 9 1 362 3661 4021 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20273 401 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
6754011 6754011 PRJNA306153_S_NODE_846_length_260_cov_3.220779_g833_i0 PRJNA306153 846 260 3.220779 8.3740254 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 464 2.57e-126   NTclustered gi|302026154|gb|GQ377660.1| 188950 g833 i0 98.846 68.9461538461538 260 3 100 0 1 260 419 678 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 17926 464 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
8714896 8714896 PRJNA306153_S_NODE_2087_length_172_cov_12.475524_g2074_i0 PRJNA306153 2087 172 12.475524 21.45790128 root 1 Root_unresolved Root_unresolved 309 7.75e-80   NTclustered gi|238617605|gb|FJ973380.1| 45107 g2074 i0 98.851 99.8604651162791 174 0 100 1 1 172 2536 2363 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 17176 309 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
9304414 9304414 PRJNA306153_S_NODE_1088_length_229_cov_9.815000_g1075_i0 PRJNA306153 1088 229 9.815 22.47635 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 145 3.28e-30   NTclustered gi|238617605|gb|FJ973380.1| 45107 g1075 i0 78.355 32.2794759825328 231 44 99 6 1 228 1656 1883 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 7392 145 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
9990399 9990399 PRJNA306153_S_NODE_1688_length_189_cov_9.325000_g1675_i0 PRJNA306153 1688 189 9.325 17.62425 root 1 Root_unresolved Root_unresolved 87.9 4.45e-13   NTclustered gi|220983376|dbj|AB453012.1| 552662 g1675 i0 93.22 2.28042328042328 59 4 31 0 128 186 3548 3606 Cercozoa sp. YPF501 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 431 87.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. YPF501
10580301 10580301 PRJNA306153_S_NODE_489_length_327_cov_22.651007_g476_i0 PRJNA306153 489 327 22.651007 74.06879289 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 407 5.7e-109   NTclustered gi|238617605|gb|FJ973380.1| 45107 g476 i0 94.03 82.3608562691132 268 16 82 0 1 268 1171 1438 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 26932 407 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
11855021 11855021 PRJNA306153_S_NODE_590_length_303_cov_9.839416_g577_i0 PRJNA306153 590 303 9.839416 29.81343048 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 542 1.37e-149   NTclustered gi|238617602|gb|FJ973377.1| 188950 g577 i0 99.007 99.9240924092409 302 3 99 0 2 303 330 29 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 30277 542 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
15679121 15679121 PRJNA306153_S_NODE_2353_length_162_cov_7.443609_g2340_i0 PRJNA306153 2353 162 7.443609 12.05864658 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 300 4.36e-77   NTclustered gi|238617602|gb|FJ973377.1| 188950 g2340 i0 100 54.0308641975309 162 0 100 0 1 162 2687 2848 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8753 300 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
16953725 16953725 PRJNA306153_S_NODE_2434_length_159_cov_5.469231_g2421_i0 PRJNA306153 2434 159 5.469231 8.69607729 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 283 4.29e-72   NTclustered gi|238617630|gb|FJ973394.1| 188950 g2421 i0 98.742 95.3962264150943 159 2 100 0 1 159 4 162 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 15168 283 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22052887 22052887 PRJNA306153_S_NODE_2378_length_161_cov_4.151515_g2365_i0 PRJNA306153 2378 161 4.151515 6.68393915 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 298 1.56e-76   NTclustered gi|238617602|gb|FJ973377.1| 188950 g2365 i0 100 1 161 0 100 0 1 161 455 615 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 161 298 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22739052 22739052 PRJNA306153_S_NODE_2578_length_155_cov_12.452381_g2565_i0 PRJNA306153 2578 155 12.452381 19.30119055 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 276 6.95e-70   NTclustered gi|46393899|gb|AY496043.1| 45107 g2565 i0 99.342 98.0645161290323 152 1 98 0 3 154 1104 1255 Heteromita globosa strain SCCAP H251 small subunit ribosomal RNA gene, partial sequence blastn 15200 276 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
23328382 23328382 PRJNA306153_S_NODE_1259_length_214_cov_12.767568_g1246_i0 PRJNA306153 1259 214 12.767568 27.32259552 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 355 1.28e-93   NTclustered gi|238617605|gb|FJ973380.1| 45107 g1246 i0 96.714 97.7757009345794 213 7 99 0 2 214 1605 1393 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 20924 355 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
24602451 24602451 PRJNA306153_S_NODE_1180_length_221_cov_6.791667_g1167_i0 PRJNA306153 1180 221 6.791667 15.00958407 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 409 1.0100000000000001e-109   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1167 i0 100 9.3393665158371 221 0 100 0 1 221 589 809 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 2064 409 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;