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contig_metadata

12 rows where bioproject = "PRJNA306153" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 12 ✖

bioproject 1

  • PRJNA306153 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
376357 376357 PRJNA306153_S_NODE_961_length_244_cov_12785.716279_g948_i0 PRJNA306153 961 244 12785.716279 31197.14772076 Betacoronavirus pandemicum 3418604 Viruses Viruses 80.5 1.01e-10   NTclustered gi|2165834303|emb|OV196009.1| 2697049 g948 i0 100 0.631147540983607 43 0 18 0 186 228 29949 29991 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 154 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
26631093 26631093 PRJNA306153_S_NODE_2701_length_153_cov_3.072581_g2688_i0 PRJNA306153 2701 153 3.072581 4.70104893 Shenzhen reo-like virus 1 2789623 Viruses Viruses 85.5 9.13e-18   NR QPN36950.1 2789623 g2688 i0 78 0.980392156862745 50 11 98 0 151 2 452 501 QPN36950.1 hypothetical protein [Shenzhen reo-like virus 1] diamond 150 85.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
27137006 27137006 PRJNA306153_S_NODE_1942_length_178_cov_2.637584_g1929_i0 PRJNA306153 1942 178 2.637584 4.69489952 Skokie reo-like virus 2789444 Viruses Viruses 53.1 3.37e-6   NR QPF16729.1 2789444 g1929 i0 40.7 0.99438202247191 59 34 99.4 1 1 177 759 816 QPF16729.1 hypothetical protein 2, partial [Skokie reo-like virus] diamond 177 53.1 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Skokie reo-like virus
27327172 27327172 PRJNA306153_S_NODE_2023_length_175_cov_1.356164_g2010_i0 PRJNA306153 2023 175 1.356164 2.373287 Shenzhen reo-like virus 1 2789623 Viruses Viruses 96.7 1.55e-21   NR QPN36950.1 2789623 g2010 i0 72.4 0.994285714285714 58 16 99.4 0 175 2 778 835 QPN36950.1 hypothetical protein [Shenzhen reo-like virus 1] diamond 174 96.7 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
28053277 28053277 PRJNA306153_S_NODE_1665_length_190_cov_3.192547_g1652_i0 PRJNA306153 1665 190 3.192547 6.0658393 Skokie reo-like virus 2789444 Viruses Viruses 52.4 7.48e-6   NR QPF16729.1 2789444 g1652 i0 41.7 0.947368421052632 60 35 94.7 0 180 1 981 1040 QPF16729.1 hypothetical protein 2, partial [Skokie reo-like virus] diamond 180 52.4 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Skokie reo-like virus
28685034 28685034 PRJNA306153_S_NODE_487_length_328_cov_2.789298_g474_i0 PRJNA306153 487 328 2.789298 9.14889744 Shenzhen reo-like virus 1 2789623 Viruses Viruses 118 3.51e-28   NR QPN36950.1 2789623 g474 i0 54.1 0.996951219512195 109 50 99.7 0 328 2 197 305 QPN36950.1 hypothetical protein [Shenzhen reo-like virus 1] diamond 327 118 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
29568861 29568861 PRJNA306153_S_NODE_810_length_265_cov_4.622881_g797_i0 PRJNA306153 810 265 4.622881 12.25063465 Shenzhen reo-like virus 1 2789623 Viruses Viruses 66.6 1.89e-10   NR QPN36950.1 2789623 g797 i0 54.5 0.622641509433962 55 25 62.3 0 233 69 1198 1252 QPN36950.1 hypothetical protein [Shenzhen reo-like virus 1] diamond 165 66.6 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
30769414 30769414 PRJNA306153_S_NODE_2534_length_157_cov_2.601562_g2521_i0 PRJNA306153 2534 157 2.601562 4.08445234 Shenzhen reo-like virus 1 2789623 Viruses Viruses 69.3 4.69e-12   NR QPN36950.1 2789623 g2521 i0 58.8 0.974522292993631 51 21 97.5 0 3 155 1052 1102 QPN36950.1 hypothetical protein [Shenzhen reo-like virus 1] diamond 153 69.3 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
30958997 30958997 PRJNA306153_S_NODE_974_length_243_cov_3.406542_g961_i0 PRJNA306153 974 243 3.406542 8.27789706 Shenzhen reo-like virus 1 2789623 Viruses Viruses 84.7 6.17e-17   NR QPN36950.1 2789623 g961 i0 48.1 0.975308641975309 79 41 97.5 0 6 242 931 1009 QPN36950.1 hypothetical protein [Shenzhen reo-like virus 1] diamond 237 84.7 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
31370068 31370068 PRJNA306153_S_NODE_2496_length_158_cov_2.674419_g2483_i0 PRJNA306153 2496 158 2.674419 4.22558202 Shenzhen reo-like virus 1 2789623 Viruses Viruses 65.5 1.11e-10   NR QPN36950.1 2789623 g2483 i0 51.9 0.987341772151899 52 25 98.7 0 158 3 145 196 QPN36950.1 hypothetical protein [Shenzhen reo-like virus 1] diamond 156 65.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
32097345 32097345 PRJNA306153_S_NODE_578_length_306_cov_2.469314_g565_i0 PRJNA306153 578 306 2.469314 7.55610084 Skokie reo-like virus 2789444 Viruses Viruses 85.5 7.92e-17   NR QPF16729.1 2789444 g565 i0 41.2 1 102 60 100 0 306 1 145 246 QPF16729.1 hypothetical protein 2, partial [Skokie reo-like virus] diamond 306 85.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Skokie reo-like virus
32589660 32589660 PRJNA306153_S_NODE_2779_length_151_cov_1.885246_g2766_i0 PRJNA306153 2779 151 1.885246 2.84672146 Viruses 10239 Viruses Viruses 52.4 4.25e-6   NR QPG92977.1 2789444 g2766 i0 68.4 2.48344370860927 38 12 75.5 0 1 114 893 930 QPG92977.1 hypothetical protein [Skokie reo-like virus] diamond 375 52.8 0.992424242424242 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Skokie reo-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;