contig_metadata
5 rows where bioproject = "PRJNA306153" and tax_clade = "core chlorophytes"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4203528 | 4203528 | PRJNA306153_S_NODE_1244_length_215_cov_5.209677_g1231_i0 | PRJNA306153 | 1244 | 215 | 5.209677 | 11.20080555 | Polytomella sp. Pringsheim 198.80 | 37502 | Plants | Plants | 195 | 2.98e-45 | NTclustered | gi|28193497|emb|AJ439528.1| | 37502 | g1231 | i0 | 85.263 | 22.9767441860465 | 190 | 27 | 88 | 1 | 23 | 211 | 524 | 335 | Polytomella sp. 'Pringsheim 198.80' mRNA for 40S ribosomal protein s5 (rs5 gene) | blastn | 4940 | 195 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Polytomella | Polytomella sp. Pringsheim 198.80 | |
| 9990401 | 9990401 | PRJNA306153_S_NODE_2348_length_162_cov_13.278195_g2335_i0 | PRJNA306153 | 2348 | 162 | 13.278195 | 21.5106759 | Chlorophyta | 3041 | Plants | Plants | 294 | 2.03e-75 | NTclustered | gi|1917464960|gb|MW136924.1| | 1249516 | g2335 | i0 | 99.383 | 99.7901234567901 | 162 | 1 | 100 | 0 | 1 | 162 | 319 | 480 | Chaetophora lobata voucher QH201901 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 16166 | 294 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chaetophorales | Chaetophoraceae | Chaetophora | Chaetophora lobata | |
| 27168831 | 27168831 | PRJNA306153_S_NODE_902_length_251_cov_3.536036_g889_i0 | PRJNA306153 | 902 | 251 | 3.536036 | 8.87545036 | Pedinophyceae sp. YPF-7 | 765719 | Plants | Plants | 131 | 9.18e-37 | NR | CAG9462620.1 | 765719 | g889 | i0 | 72.3 | 18.8486055776892 | 83 | 23 | 99.2 | 0 | 249 | 1 | 10 | 92 | CAG9462620.1 unnamed protein product [Pedinophyceae sp. YPF-701] | diamond | 4731 | 131 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Pedinophyceae | Pedinophyceae sp. YPF-701 | ||||
| 27281593 | 27281593 | PRJNA306153_S_NODE_1403_length_204_cov_5.017143_g1390_i0 | PRJNA306153 | 1403 | 204 | 5.017143 | 10.23497172 | Chlorellaceae | 35461 | Plants | Plants | 73.6 | 1.22e-13 | NR | PRW39386.1 | 3076 | g1390 | i0 | 57.4 | 6.11764705882353 | 61 | 25 | 88.2 | 1 | 204 | 25 | 198 | 258 | PRW39386.1 40S ribosomal S3a-2 isoform B [Chlorella sorokiniana] | diamond | 1248 | 74.3 | 0.990578734858681 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella sorokiniana | |
| 30422183 | 30422183 | PRJNA306153_S_NODE_1193_length_220_cov_3.570681_g1180_i0 | PRJNA306153 | 1193 | 220 | 3.570681 | 7.8554982 | Scenedesmus sp. NREL 46B-D3 | 2650976 | Plants | Plants | 103 | 6.22e-25 | NR | KAF6257032.1 | 2650976 | g1180 | i0 | 70.8 | 11.6727272727273 | 72 | 19 | 95.5 | 1 | 216 | 7 | 63 | 134 | KAF6257032.1 component of cytosolic 80S ribosome and 40S small subunit [Scenedesmus sp. NREL 46B-D3] | diamond | 2568 | 103 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Scenedesmus | Scenedesmus sp. NREL 46B-D3 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;