contig_metadata
9 rows where bioproject = "PRJNA299585" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4202224 | 4202224 | PRJNA299585_S_NODE_11284_length_193_cov_2.463415_g11054_i0 | PRJNA299585 | 11284 | 193 | 2.463415 | 4.75439095 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 357 | 3.1499999999999996e-94 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g11054 | i0 | 100 | 115.046632124352 | 193 | 0 | 100 | 0 | 1 | 193 | 1672413 | 1672605 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 22204 | 357 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 4889653 | 4889653 | PRJNA299585_S_NODE_5584_length_337_cov_47.512987_g5354_i0 | PRJNA299585 | 5584 | 337 | 47.512987 | 160.11876619 | Cetobacterium | 180162 | Bacteria | Bacteria | 612 | 1.16e-170 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g5354 | i0 | 99.407 | 494.023738872404 | 337 | 2 | 100 | 0 | 1 | 337 | 1805012 | 1804676 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 166486 | 617 | 0.991896272285251 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 6164469 | 6164469 | PRJNA299585_S_NODE_11545_length_190_cov_2.590062_g11315_i0 | PRJNA299585 | 11545 | 190 | 2.590062 | 4.9211178 | Cetobacterium | 180162 | Bacteria | Bacteria | 329 | 6.730000000000001e-86 | NTclustered | gi|2865366169|gb|CP122292.1| | 188913 | g11315 | i0 | 97.895 | 7.8 | 190 | 4 | 100 | 0 | 1 | 190 | 899174 | 898985 | Cetobacterium somerae strain MSU41 chromosome, complete genome | blastn | 1482 | 329 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 14404011 | 14404011 | PRJNA299585_S_NODE_11592_length_189_cov_4.850000_g11362_i0 | PRJNA299585 | 11592 | 189 | 4.85 | 9.1665 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 265 | 1.91e-66 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g11362 | i0 | 93.82 | 4.8042328042328 | 178 | 7 | 93 | 4 | 1 | 176 | 1561642 | 1561817 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 908 | 265 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 18913138 | 18913138 | PRJNA299585_S_NODE_11995_length_184_cov_2.845161_g11765_i0 | PRJNA299585 | 11995 | 184 | 2.845161 | 5.23509624 | Cetobacterium | 180162 | Bacteria | Bacteria | 340 | 2.99e-89 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g11765 | i0 | 100 | 194.152173913043 | 184 | 0 | 100 | 0 | 1 | 184 | 1898731 | 1898914 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 35724 | 340 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 21463485 | 21463485 | PRJNA299585_S_NODE_4557_length_389_cov_6.822222_g4327_i0 | PRJNA299585 | 4557 | 389 | 6.822222 | 26.53844358 | Cetobacterium | 180162 | Bacteria | Bacteria | 556 | 6.460000000000001e-154 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g4327 | i0 | 92.727 | 37.305912596401 | 385 | 28 | 99 | 0 | 5 | 389 | 67561 | 67177 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 14512 | 556 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 28702544 | 28702544 | PRJNA299585_S_NODE_13807_length_166_cov_3.832117_g13577_i0 | PRJNA299585 | 13807 | 166 | 3.832117 | 6.36131422 | Cetobacterium | 180162 | Bacteria | Bacteria | 99 | 6.88e-25 | NR | WP_297597736.1 | 527638 | g13577 | i0 | 79.2 | 1.91566265060241 | 53 | 11 | 95.8 | 0 | 166 | 8 | 62 | 114 | WP_297597736.1 Fur family transcriptional regulator [uncultured Cetobacterium sp.] | diamond | 318 | 100 | 0.99 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | uncultured Cetobacterium sp. | ||
| 28969091 | 28969091 | PRJNA299585_S_NODE_14688_length_159_cov_2.876923_g14458_i0 | PRJNA299585 | 14688 | 159 | 2.876923 | 4.57430757 | unclassified Cetobacterium | 2630983 | Bacteria | Bacteria | 104 | 3.0500000000000003e-27 | NR | WP_047383608.1 | 2630983 | g14458 | i0 | 100 | 0.981132075471698 | 52 | 0 | 98.1 | 0 | 2 | 157 | 22 | 73 | WP_047383608.1 MULTISPECIES: desulfoferrodoxin family protein [unclassified Cetobacterium] | diamond | 156 | 104 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | |||
| 31211195 | 31211195 | PRJNA299585_S_NODE_12735_length_176_cov_2.292517_g12505_i0 | PRJNA299585 | 12735 | 176 | 2.292517 | 4.03482992 | Cetobacterium | 180162 | Bacteria | Bacteria | 93.6 | 1.1e-23 | NR | WP_291941138.1 | 180162 | g12505 | i0 | 88.1 | 0.715909090909091 | 42 | 5 | 71.6 | 0 | 51 | 176 | 1 | 42 | WP_291941138.1 MULTISPECIES: rubredoxin [Cetobacterium] | diamond | 126 | 93.6 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;