contig_metadata
38 rows where bioproject = "PRJNA293022", tax_phylum = "Spirochaetota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1648044 | 1648044 | PRJNA293022_P_NODE_39602_length_222_cov_1.173410_g38865_i0 | PRJNA293022 | 39602 | 222 | 1.17341 | 2.6049702 | Treponema vincentii | 69710 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|2034589463|gb|CP050497.1| | 69710 | g38865 | i0 | 100 | 0.126126126126126 | 28 | 0 | 13 | 0 | 168 | 195 | 2443789 | 2443816 | Treponema vincentii strain OMZ 806 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 2923859 | 2923859 | PRJNA293022_P_NODE_16783_length_348_cov_3.117057_g16046_i0 | PRJNA293022 | 16783 | 348 | 3.117057 | 10.84735836 | Treponema rectale | 744512 | Bacteria | Bacteria | 449 | 9.999999999999998e-122 | NTclustered | gi|1919550644|gb|CP031517.1| | 744512 | g16046 | i0 | 90.173 | 200.683908045977 | 346 | 33 | 99 | 1 | 3 | 348 | 1039639 | 1039983 | Treponema rectale strain CHPA chromosome, complete genome | blastn | 69838 | 449 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema rectale | ||
| 3610175 | 3610175 | PRJNA293022_P_NODE_22643_length_298_cov_2.887550_g21906_i0 | PRJNA293022 | 22643 | 298 | 2.88755 | 8.604899 | Treponema | 157 | Bacteria | Bacteria | 547 | 2.8999999999999994e-151 | NTclustered | gi|2265193197|gb|CP058347.1| | 158 | g21906 | i0 | 100 | 185.385906040268 | 296 | 0 | 99 | 0 | 1 | 296 | 1663410 | 1663705 | Treponema denticola strain OKA3 chromosome, complete genome | blastn | 55245 | 547 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 3610247 | 3610247 | PRJNA293022_P_NODE_59603_length_180_cov_1.564885_g58866_i0 | PRJNA293022 | 59603 | 180 | 1.564885 | 2.816793 | Treponema | 157 | Bacteria | Bacteria | 329 | 6.3e-86 | NTclustered | gi|2265193197|gb|CP058347.1| | 158 | g58866 | i0 | 100 | 95.2444444444444 | 178 | 0 | 99 | 0 | 1 | 178 | 1662051 | 1662228 | Treponema denticola strain OKA3 chromosome, complete genome | blastn | 17144 | 329 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 4200429 | 4200429 | PRJNA293022_P_NODE_41764_length_216_cov_1.281437_g41027_i0 | PRJNA293022 | 41764 | 216 | 1.281437 | 2.76790392 | Treponema parvum | 138851 | Bacteria | Bacteria | 255 | 1.35e-63 | NTclustered | gi|2023444933|gb|CP054257.1| | 138851 | g41027 | i0 | 88.073 | 47.5138888888889 | 218 | 22 | 100 | 3 | 1 | 216 | 1517695 | 1517910 | Treponema parvum strain ATCC 700773 chromosome, complete genome | blastn | 10263 | 255 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 5476830 | 5476830 | PRJNA293022_P_NODE_5725_length_591_cov_4.547970_g2955_i1 | PRJNA293022 | 5725 | 591 | 4.54797 | 26.8785027 | Treponema parvum | 138851 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|2023444933|gb|CP054257.1| | 138851 | g2955 | i1 | 87.197 | 122.09475465313 | 578 | 63 | 97 | 11 | 19 | 591 | 1517054 | 1516483 | Treponema parvum strain ATCC 700773 chromosome, complete genome | blastn | 72158 | 647 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 6162543 | 6162543 | PRJNA293022_P_NODE_66725_length_169_cov_4.150000_g65988_i0 | PRJNA293022 | 66725 | 169 | 4.15 | 7.0135 | Treponema | 157 | Bacteria | Bacteria | 172 | 1.04e-38 | NTclustered | gi|1928027651|gb|CP061839.1| | 409322 | g65988 | i0 | 85.542 | 5.89349112426035 | 166 | 23 | 98 | 1 | 4 | 169 | 389194 | 389358 | Treponema pedis strain KS1 chromosome, complete genome | blastn | 996 | 172 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pedis | ||
| 6162580 | 6162580 | PRJNA293022_P_NODE_76425_length_163_cov_2.701754_g75688_i0 | PRJNA293022 | 76425 | 163 | 2.701754 | 4.40385902 | Treponema | 157 | Bacteria | Bacteria | 219 | 1.2699999999999999e-52 | NTclustered | gi|1928027651|gb|CP061839.1| | 409322 | g75688 | i0 | 91.358 | 99.1042944785276 | 162 | 11 | 98 | 3 | 2 | 161 | 387838 | 387998 | Treponema pedis strain KS1 chromosome, complete genome | blastn | 16154 | 219 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pedis | ||
| 6750917 | 6750917 | PRJNA293022_P_NODE_32626_length_245_cov_1.770408_g31889_i0 | PRJNA293022 | 32626 | 245 | 1.770408 | 4.3374996 | Treponema peruense | 2787628 | Bacteria | Bacteria | 124 | 4.62e-24 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g31889 | i0 | 88.35 | 1.99183673469388 | 103 | 12 | 42 | 0 | 143 | 245 | 1009883 | 1009985 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 488 | 124 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 8712365 | 8712365 | PRJNA293022_P_NODE_3527_length_729_cov_3.751471_g2955_i0 | PRJNA293022 | 3527 | 729 | 3.751471 | 27.34822359 | Treponema | 157 | Bacteria | Bacteria | 723 | 0 | NTclustered | gi|470488561|ref|NR_076878.1| | 81028 | g2955 | i0 | 85.165 | 137.318244170096 | 728 | 83 | 98 | 22 | 17 | 729 | 1121 | 1838 | Treponema brennaborense strain DD5/3 23S ribosomal RNA gene, complete sequence | blastn | 100105 | 723 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 8712408 | 8712408 | PRJNA293022_P_NODE_54187_length_189_cov_1.864286_g53450_i0 | PRJNA293022 | 54187 | 189 | 1.864286 | 3.52350054 | Treponema | 157 | Bacteria | Bacteria | 344 | 2.39e-90 | NTclustered | gi|62996613|gb|DQ003624.1| | 326371 | g53450 | i0 | 100 | 94.8042328042328 | 186 | 0 | 98 | 0 | 1 | 186 | 186 | 1 | Treponema genomosp. P5 oral clone MB3_P23 16S ribosomal RNA gene, partial sequence | blastn | 17918 | 344 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema genomosp. P5 oral clone MB3_P23 | ||
| 9301459 | 9301459 | PRJNA293022_P_NODE_65428_length_171_cov_2.204918_g64691_i0 | PRJNA293022 | 65428 | 171 | 2.204918 | 3.77040978 | uncultured Treponema sp. | 162155 | Bacteria | Bacteria | 307 | 2.7700000000000003e-79 | NTclustered | gi|730904658|gb|KP118000.1| | 162155 | g64691 | i0 | 99.408 | 103.473684210526 | 169 | 1 | 99 | 0 | 1 | 169 | 220 | 52 | Uncultured Treponema sp. clone OTU1884 16S ribosomal RNA gene, partial sequence | blastn | 17694 | 307 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 9301473 | 9301473 | PRJNA293022_P_NODE_67408_length_169_cov_0.866667_g66671_i0 | PRJNA293022 | 67408 | 169 | 0.866667 | 1.46466723 | Treponema socranskii | 53419 | Bacteria | Bacteria | 298 | 1.64e-76 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g66671 | i0 | 98.802 | 2.96449704142012 | 167 | 2 | 99 | 0 | 1 | 167 | 419259 | 419425 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 501 | 298 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 11851887 | 11851887 | PRJNA293022_P_NODE_27890_length_266_cov_4.824885_g27153_i0 | PRJNA293022 | 27890 | 266 | 4.824885 | 12.8341941 | Treponema parvum | 138851 | Bacteria | Bacteria | 255 | 1.73e-63 | NTclustered | gi|2023447176|gb|CP054142.1| | 138851 | g27153 | i0 | 84.791 | 164.526315789474 | 263 | 31 | 97 | 6 | 5 | 262 | 452593 | 452851 | Treponema parvum strain ATCC 700770 chromosome, complete genome | blastn | 43764 | 255 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 11852146 | 11852146 | PRJNA293022_P_NODE_9910_length_455_cov_1.970443_g9177_i0 | PRJNA293022 | 9910 | 455 | 1.970443 | 8.96551565 | Borreliella garinii | 29519 | Bacteria | Bacteria | 52.8 | 0.044 | NTclustered | gi|2371381440|gb|CP075234.1| | 29519 | g9177 | i0 | 94.286 | 0.153846153846154 | 35 | 0 | 7 | 2 | 214 | 246 | 773757 | 773791 | Borreliella garinii strain JAASAAF1012 chromosome, complete genome | blastn | 70 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borreliella | Borreliella garinii | ||
| 12538262 | 12538262 | PRJNA293022_P_NODE_65830_length_171_cov_1.065574_g65093_i0 | PRJNA293022 | 65830 | 171 | 1.065574 | 1.82213154 | Treponema | 157 | Bacteria | Bacteria | 302 | 1.29e-77 | NTclustered | gi|379647715|gb|JF700258.1| | 158 | g65093 | i0 | 98.817 | 104.883040935673 | 169 | 2 | 99 | 0 | 1 | 169 | 274 | 106 | Treponema denticola strain ATCC 700768 16S ribosomal RNA gene, partial sequence | blastn | 17935 | 302 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 13127045 | 13127045 | PRJNA293022_P_NODE_28871_length_262_cov_1.201878_g28134_i0 | PRJNA293022 | 28871 | 262 | 1.201878 | 3.14892036 | uncultured Treponema sp. | 162155 | Bacteria | Bacteria | 108 | 5.03e-19 | NTclustered | gi|1826584144|gb|MT257088.1| | 162155 | g28134 | i0 | 74.17 | 1.03435114503817 | 271 | 58 | 100 | 11 | 1 | 262 | 270 | 3 | Uncultured Treponema sp. clone G2F2_RC 23S ribosomal RNA gene, partial sequence | blastn | 271 | 108 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 13127097 | 13127097 | PRJNA293022_P_NODE_40651_length_219_cov_1.217647_g39914_i0 | PRJNA293022 | 40651 | 219 | 1.217647 | 2.66664693 | Treponema socranskii | 53419 | Bacteria | Bacteria | 385 | 1.68e-102 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g39914 | i0 | 98.618 | 21.0091324200913 | 217 | 3 | 99 | 0 | 1 | 217 | 2593879 | 2594095 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 4601 | 385 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 14402110 | 14402110 | PRJNA293022_P_NODE_16092_length_356_cov_1.664495_g15355_i0 | PRJNA293022 | 16092 | 356 | 1.664495 | 5.9256022 | Entomospira culicis | 2719989 | Bacteria | Bacteria | 302 | 3.03e-77 | NTclustered | gi|2446645866|gb|CP118185.1| | 2719989 | g15355 | i0 | 82.436 | 169.151685393258 | 353 | 54 | 99 | 6 | 3 | 354 | 1409256 | 1408911 | Entomospira culicis strain BR149 chromosome, complete genome | blastn | 60218 | 302 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Entomospira | Entomospira culicis | ||
| 14402247 | 14402247 | PRJNA293022_P_NODE_48412_length_200_cov_2.721854_g47675_i0 | PRJNA293022 | 48412 | 200 | 2.721854 | 5.443708 | Treponema phagedenis | 162 | Bacteria | Bacteria | 193 | 9.81e-45 | NTclustered | gi|1732601887|gb|CP042818.1| | 162 | g47675 | i0 | 84.422 | 83.295 | 199 | 27 | 99 | 4 | 3 | 200 | 2502579 | 2502384 | Treponema phagedenis strain B43.1 chromosome, complete genome | blastn | 16659 | 193 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema phagedenis | ||
| 14402264 | 14402264 | PRJNA293022_P_NODE_51672_length_194_cov_1.062069_g50935_i0 | PRJNA293022 | 51672 | 194 | 1.062069 | 2.06041386 | Treponema parvum | 138851 | Bacteria | Bacteria | 272 | 1.1799999999999996e-68 | NTclustered | gi|2023444933|gb|CP054257.1| | 138851 | g50935 | i0 | 93.443 | 180.443298969072 | 183 | 12 | 94 | 0 | 12 | 194 | 1517436 | 1517618 | Treponema parvum strain ATCC 700773 chromosome, complete genome | blastn | 35006 | 272 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 15087274 | 15087274 | PRJNA293022_P_NODE_26872_length_272_cov_0.923767_g26135_i0 | PRJNA293022 | 26872 | 272 | 0.923767 | 2.51264624 | Entomospira | 2834378 | Bacteria | Bacteria | 196 | 1.09e-45 | NTclustered | gi|2446641004|gb|CP118168.1| | 2719987 | g26135 | i0 | 85.638 | 13 | 188 | 25 | 69 | 2 | 12 | 198 | 323536 | 323722 | Entomospira nematocerorum strain BR208 chromosome | blastn | 3536 | 196 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Entomospira | Entomospira nematocerorum | ||
| 15087354 | 15087354 | PRJNA293022_P_NODE_63872_length_173_cov_3.177419_g63135_i0 | PRJNA293022 | 63872 | 173 | 3.177419 | 5.49693487 | Treponema | 157 | Bacteria | Bacteria | 294 | 2.19e-75 | NTclustered | gi|2265172126|gb|CP051522.1| | 158 | g63135 | i0 | 97.661 | 190.21387283237 | 171 | 4 | 99 | 0 | 1 | 171 | 513782 | 513612 | Treponema denticola strain OMZ 910 chromosome, complete genome | blastn | 32907 | 294 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 15087355 | 15087355 | PRJNA293022_P_NODE_64012_length_173_cov_2.088710_g63275_i0 | PRJNA293022 | 64012 | 173 | 2.08871 | 3.6134683 | Treponema | 157 | Bacteria | Bacteria | 196 | 6.339999999999999e-46 | NTclustered | gi|2265193197|gb|CP058347.1| | 158 | g63275 | i0 | 87.283 | 58.5260115606936 | 173 | 20 | 99 | 1 | 3 | 173 | 1663150 | 1662978 | Treponema denticola strain OKA3 chromosome, complete genome | blastn | 10125 | 196 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 15087404 | 15087404 | PRJNA293022_P_NODE_9192_length_472_cov_2.541371_g8461_i0 | PRJNA293022 | 9192 | 472 | 2.541371 | 11.99527112 | Entomospira | 2834378 | Bacteria | Bacteria | 398 | 5.119999999999997e-106 | NTclustered | gi|2446641004|gb|CP118168.1| | 2719987 | g8461 | i0 | 83.108 | 122.728813559322 | 444 | 67 | 94 | 7 | 30 | 472 | 325022 | 324586 | Entomospira nematocerorum strain BR208 chromosome | blastn | 57928 | 398 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Entomospira | Entomospira nematocerorum | ||
| 16362137 | 16362137 | PRJNA293022_P_NODE_12073_length_411_cov_2.400552_g11336_i0 | PRJNA293022 | 12073 | 411 | 2.400552 | 9.86626872 | Treponema | 157 | Bacteria | Bacteria | 680 | 0 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g11336 | i0 | 96.585 | 203.335766423358 | 410 | 14 | 99 | 0 | 1 | 410 | 907740 | 907331 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 83571 | 686 | 0.991253644314869 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 17637352 | 17637352 | PRJNA293022_P_NODE_4694_length_647_cov_2.459866_g4045_i0 | PRJNA293022 | 4694 | 647 | 2.459866 | 15.91533302 | Treponema | 157 | Bacteria | Bacteria | 1125 | 0 | NTclustered | gi|2265187740|gb|CP054258.1| | 69713 | g4045 | i0 | 98.14 | 156.149922720247 | 645 | 12 | 99 | 0 | 3 | 647 | 907781 | 908425 | Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome | blastn | 101029 | 1125 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema socranskii | ||
| 18224873 | 18224873 | PRJNA293022_P_NODE_21295_length_308_cov_2.552124_g20558_i0 | PRJNA293022 | 21295 | 308 | 2.552124 | 7.86054192 | Treponema denticola | 158 | Bacteria | Bacteria | 569 | 6.419999999999998e-158 | NTclustered | gi|2277007739|gb|CP038800.1| | 158 | g20558 | i0 | 100 | 193.288961038961 | 308 | 0 | 100 | 0 | 1 | 308 | 1102566 | 1102873 | Treponema denticola strain ATCC 700768 chromosome, complete genome | blastn | 59533 | 569 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 19499243 | 19499243 | PRJNA293022_P_NODE_51556_length_194_cov_1.420690_g50819_i0 | PRJNA293022 | 51556 | 194 | 1.42069 | 2.7561386 | Entomospira entomophila | 2719988 | Bacteria | Bacteria | 202 | 1.5699999999999998e-47 | NTclustered | gi|2446642546|gb|CP118174.1| | 2719988 | g50819 | i0 | 86.486 | 133.432989690722 | 185 | 23 | 95 | 2 | 1 | 185 | 327196 | 327378 | Entomospira entomophila strain BR193 chromosome | blastn | 25886 | 202 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Spirochaetaceae | Entomospira | Entomospira entomophila | ||
| 20185835 | 20185835 | PRJNA293022_P_NODE_67156_length_169_cov_1.550000_g66419_i0 | PRJNA293022 | 67156 | 169 | 1.55 | 2.6195 | Treponema | 157 | Bacteria | Bacteria | 224 | 2.8299999999999995e-54 | NTclustered | gi|2265199313|gb|CP058624.1| | 158 | g66419 | i0 | 91.925 | 156.076923076923 | 161 | 11 | 95 | 2 | 7 | 166 | 1584555 | 1584396 | Treponema denticola strain OMZ 854 chromosome, complete genome | blastn | 26377 | 224 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 20774718 | 20774718 | PRJNA293022_P_NODE_32537_length_245_cov_2.882653_g31800_i0 | PRJNA293022 | 32537 | 245 | 2.882653 | 7.06249985 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 191 | 4.49e-44 | NTclustered | gi|2621706436|emb|OY764216.1| | 2053615 | g31800 | i0 | 81.07 | 169.530612244898 | 243 | 43 | 99 | 3 | 1 | 243 | 1936338 | 1936099 | MAG: Spirochaetia bacterium isolate 151cca69-ec02-4520-8068-0d6d6324a753 genome assembly, chromosome: 1 | blastn | 41535 | 191 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 21461551 | 21461551 | PRJNA293022_P_NODE_8077_length_503_cov_10.090308_g7353_i0 | PRJNA293022 | 8077 | 503 | 10.090308 | 50.75424924 | Treponema | 157 | Bacteria | Bacteria | 904 | 0 | NTclustered | gi|1807378492|gb|CP048020.1| | 69710 | g7353 | i0 | 99.202 | 189.751491053678 | 501 | 4 | 99 | 0 | 1 | 501 | 2079386 | 2079886 | Treponema vincentii strain OMZ 804 chromosome, complete genome | blastn | 95445 | 904 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema vincentii | ||
| 23325405 | 23325405 | PRJNA293022_P_NODE_6279_length_567_cov_5.102317_g5575_i0 | PRJNA293022 | 6279 | 567 | 5.102317 | 28.93013739 | uncultured Spirochaetia bacterium | 2563800 | Bacteria | Bacteria | 870 | 0 | NTclustered | gi|2213050919|gb|ON086745.1| | 2563800 | g5575 | i0 | 94.376 | 93.0970017636684 | 569 | 29 | 99 | 2 | 2 | 567 | 7 | 575 | Uncultured Spirochaetia bacterium clone AC_BRV01 16S ribosomal RNA gene, partial sequence | blastn | 52786 | 870 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | uncultured Spirochaetia bacterium | |||||
| 24599414 | 24599414 | PRJNA293022_P_NODE_49520_length_198_cov_1.389262_g48783_i0 | PRJNA293022 | 49520 | 198 | 1.389262 | 2.75073876 | Treponema pedis | 409322 | Bacteria | Bacteria | 209 | 9.63e-50 | NTclustered | gi|530723550|gb|CP004120.1| | 1291379 | g48783 | i0 | 85.93 | 89.7525252525252 | 199 | 24 | 99 | 3 | 1 | 196 | 1239931 | 1239734 | Treponema pedis str. T A4, complete genome | blastn | 17771 | 209 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema pedis | ||
| 25285745 | 25285745 | PRJNA293022_P_NODE_12500_length_404_cov_2.757746_g11763_i0 | PRJNA293022 | 12500 | 404 | 2.757746 | 11.14129384 | Treponema | 157 | Bacteria | Bacteria | 525 | 1.8999999999999994e-144 | NTclustered | gi|470488561|ref|NR_076878.1| | 81028 | g11763 | i0 | 90.22 | 167.918316831683 | 409 | 31 | 100 | 8 | 1 | 404 | 1434 | 1838 | Treponema brennaborense strain DD5/3 23S ribosomal RNA gene, complete sequence | blastn | 67839 | 525 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema brennaborense | ||
| 25285886 | 25285886 | PRJNA293022_P_NODE_78600_length_162_cov_1.442478_g77863_i0 | PRJNA293022 | 78600 | 162 | 1.442478 | 2.33681436 | Treponema | 157 | Bacteria | Bacteria | 296 | 5.64e-76 | NTclustered | gi|1139288407|emb|LT675011.1| | 162155 | g77863 | i0 | 100 | 98.5617283950617 | 160 | 0 | 99 | 0 | 1 | 160 | 238 | 79 | Uncultured Treponema sp. partial 16S rRNA gene, isolate 482N_425 | blastn | 15967 | 296 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | uncultured Treponema sp. | ||
| 28684996 | 28684996 | PRJNA293022_P_NODE_77787_length_163_cov_0.912281_g77050_i0 | PRJNA293022 | 77787 | 163 | 0.912281 | 1.48701803 | Brevinema andersonii | 34097 | Bacteria | Bacteria | 82.8 | 4.53e-17 | NR | WP_092318314.1 | 34097 | g77050 | i0 | 67.9 | 0.975460122699387 | 53 | 17 | 97.5 | 0 | 160 | 2 | 149 | 201 | WP_092318314.1 UDP-glucose 4-epimerase GalE [Brevinema andersonii] | diamond | 159 | 82.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brevinematales | Brevinemataceae | Brevinema | Brevinema andersonii | ||
| 29221751 | 29221751 | PRJNA293022_P_NODE_70509_length_167_cov_0.881356_g69772_i0 | PRJNA293022 | 70509 | 167 | 0.881356 | 1.47186452 | Treponema sp. Marseille-Q413 | 166 | Bacteria | Bacteria | 111 | 2.2399999999999993e-28 | NR | WP_187385369.1 | 2766702 | g69772 | i0 | 92.7 | 0.988023952095808 | 55 | 4 | 98.8 | 0 | 165 | 1 | 3 | 57 | WP_187385369.1 BRO family protein [Treponema sp. Marseille-Q4130] | diamond | 165 | 111 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q4130 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;