RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA293022" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA293022 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2923877 2923877 PRJNA293022_P_NODE_22063_length_302_cov_6.245059_g21326_i0 PRJNA293022 22063 302 6.245059 18.86007818 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 508 1.39e-139   NTclustered gi|28273263|gb|AY157151.1| 52061 g21326 i0 98.611 61.5596026490066 288 2 95 2 1 286 295 8 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 18591 508 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
4200304 4200304 PRJNA293022_P_NODE_12024_length_412_cov_1.691460_g11287_i0 PRJNA293022 12024 412 1.69146 6.9688152 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 717 0   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g11287 i0 98.058 44.8689320388349 412 8 100 0 1 412 8945 8534 Stenostomum sthenum mitochondrion, complete genome blastn 18486 717 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
14402176 14402176 PRJNA293022_P_NODE_31692_length_249_cov_1.030000_g30955_i0 PRJNA293022 31692 249 1.03 2.5647 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 412 8.97e-111   NTclustered gi|68479954|gb|DQ076149.1| 6182 g30955 i0 96.761 0.991967871485944 247 8 99 0 3 249 12 258 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 247 412 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
16362213 16362213 PRJNA293022_P_NODE_48833_length_199_cov_3.453333_g48096_i0 PRJNA293022 48833 199 3.453333 6.87213267 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 364 1.9499999999999995e-96   NTclustered gi|2866376384|gb|PQ722296.1| 39377 g48096 i0 100 99.2261306532663 197 0 99 0 2 198 289 93 Stenostomum sp. (in: flatworms) isolate F8 small subunit ribosomal RNA gene, partial sequence blastn 19746 364 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sp. (in: flatworms)
20185757 20185757 PRJNA293022_P_NODE_34196_length_239_cov_1.873684_g33459_i0 PRJNA293022 34196 239 1.873684 4.47810476 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.5 1.27e-14   NTclustered gi|1246719163|gb|MF383122.1| 2039861 g33459 i0 90.141 27.5606694560669 71 7 30 0 83 153 1221 1151 Sluysia triapertura isolate MR1645 28S ribosomal RNA gene, partial sequence blastn 6587 93.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Uteriporidae Sluysia Sluysia triapertura
21461401 21461401 PRJNA293022_P_NODE_14357_length_377_cov_4.667683_g13620_i0 PRJNA293022 14357 377 4.667683 17.59716491 Stenostomum 39238 Platyhelminthes Platyhelminthes 643 4.659999999999998e-180   NTclustered gi|209968707|gb|FJ384870.1| 52061 g13620 i0 97.6 67.2970822281167 375 9 99 0 1 375 691 317 Stenostomum leucops isolate K05_55 28S ribosomal RNA gene, partial sequence blastn 25371 643 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
30376591 30376591 PRJNA293022_P_NODE_61572_length_177_cov_1.437500_g60835_i0 PRJNA293022 61572 177 1.4375 2.544375 root 1 Root_unresolved Root_unresolved 107 8.47e-28   NR VZH90202.1 99802 g60835 i0 82.5 20.0169491525424 57 10 96.6 0 177 7 93 149 VZH90202.1 unnamed protein product [Spirometra erinaceieuropaei] diamond 3543 107 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
31496511 31496511 PRJNA293022_P_NODE_79116_length_162_cov_0.920354_g78379_i0 PRJNA293022 79116 162 0.920354 1.49097348 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 62.4 1.25e-9   NR PAA84628.1 282301 g78379 i0 66 3.01851851851852 53 15 92.6 1 159 10 10 62 PAA84628.1 hypothetical protein BOX15_Mlig028036g2 [Macrostomum lignano] diamond 489 62.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;