contig_metadata
5 rows where bioproject = "PRJNA293022", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6750912 | 6750912 | PRJNA293022_P_NODE_31006_length_252_cov_0.935961_g30269_i0 | PRJNA293022 | 31006 | 252 | 0.935961 | 2.35862172 | Tobamovirus rehmanniae | 3432888 | Viruses | Viruses | 429 | 9.04e-116 | NTclustered | gi|354721027|dbj|AB628188.1| | 425279 | g30269 | i0 | 97.6 | 95.1507936507936 | 250 | 6 | 99 | 0 | 1 | 250 | 4009 | 3760 | Rehmannia mosaic virus genomic RNA, complete genome, isolate: Japanese | blastn | 23978 | 429 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus rehmanniae | ||
| 11851955 | 11851955 | PRJNA293022_P_NODE_42790_length_213_cov_2.542683_g42053_i0 | PRJNA293022 | 42790 | 213 | 2.542683 | 5.41591479 | Chrocorelt virus | 3129514 | Viruses | Viruses | 283 | 6.109999999999999e-72 | NTclustered | gi|2717317772|gb|PP171962.1| | 3129514 | g42053 | i0 | 91.346 | 128.981220657277 | 208 | 16 | 98 | 1 | 6 | 213 | 2475 | 2680 | MAG: Chrocorelt virus isolate CC1B_k141_7916 genomic sequence | blastn | 27473 | 283 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Magsaviricetes | Nodamuvirales | Chrocorelt virus | ||||
| 20774734 | 20774734 | PRJNA293022_P_NODE_35417_length_235_cov_0.946237_g34680_i0 | PRJNA293022 | 35417 | 235 | 0.946237 | 2.22365695 | Tobamovirus tabaci | 3432891 | Viruses | Viruses | 394 | 3.04e-105 | NTclustered | gi|2321498817|gb|OL471714.1| | 12242 | g34680 | i0 | 97.009 | 99.4170212765957 | 234 | 7 | 99 | 0 | 1 | 234 | 5626 | 5393 | Tobacco mosaic virus isolate TMV_BS, complete sequence | blastn | 23363 | 394 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus tabaci | ||
| 21461489 | 21461489 | PRJNA293022_P_NODE_52097_length_193_cov_1.430556_g51360_i0 | PRJNA293022 | 52097 | 193 | 1.430556 | 2.76097308 | Tobamovirus | 12234 | Viruses | Viruses | 350 | 5.27e-92 | NTclustered | gi|2201440261|gb|OL652662.1| | 12253 | g51360 | i0 | 99.479 | 99.4818652849741 | 192 | 1 | 99 | 0 | 1 | 192 | 5359 | 5168 | Tomato mosaic virus isolate NVWA36783860, complete genome | blastn | 19200 | 350 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus tomatotessellati | ||
| 22049960 | 22049960 | PRJNA293022_P_NODE_77418_length_163_cov_0.912281_g76681_i0 | PRJNA293022 | 77418 | 163 | 0.912281 | 1.48701803 | Tobamovirus tabaci | 3432891 | Viruses | Viruses | 292 | 7.35e-75 | NTclustered | gi|2438595701|gb|ON156784.1| | 12242 | g76681 | i0 | 99.379 | 98.7730061349693 | 161 | 1 | 99 | 0 | 1 | 161 | 3669 | 3509 | Tobacco mosaic virus isolate Ta9, complete genome | blastn | 16100 | 292 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus tabaci |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;