contig_metadata
22 rows where bioproject = "PRJNA293022", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2335012 | 2335012 | PRJNA293022_P_NODE_73382_length_165_cov_1.750000_g72645_i0 | PRJNA293022 | 73382 | 165 | 1.75 | 2.8875 | Bdellovibrio | 958 | Bacteria | Bacteria | 195 | 2.17e-45 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g72645 | i0 | 88.623 | 512.721212121212 | 167 | 10 | 99 | 7 | 1 | 163 | 2950187 | 2950348 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 84599 | 195 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 2923971 | 2923971 | PRJNA293022_P_NODE_44623_length_209_cov_1.287500_g43886_i0 | PRJNA293022 | 44623 | 209 | 1.2875 | 2.690875 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 235 | 1.6999999999999998e-57 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g43886 | i0 | 89.362 | 702.574162679426 | 188 | 18 | 89 | 2 | 1 | 187 | 3448031 | 3448217 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 146838 | 235 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 2924031 | 2924031 | PRJNA293022_P_NODE_57763_length_183_cov_1.537313_g57026_i0 | PRJNA293022 | 57763 | 183 | 1.537313 | 2.81328279 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 246 | 6.659999999999999e-61 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g57026 | i0 | 90.957 | 88.9289617486339 | 188 | 10 | 99 | 4 | 3 | 183 | 611439 | 611626 | Bdellovibrio bacteriovorus W, complete genome | blastn | 16274 | 246 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 2924169 | 2924169 | PRJNA293022_P_NODE_79963_length_161_cov_3.428571_g79226_i0 | PRJNA293022 | 79963 | 161 | 3.428571 | 5.51999931 | Bdellovibrio sp. qaytius | 1916293 | Bacteria | Bacteria | 287 | 3.37e-73 | NTclustered | gi|1552089877|gb|CP025734.1| | 1916293 | g79226 | i0 | 99.367 | 85.8819875776397 | 158 | 1 | 98 | 0 | 2 | 159 | 666658 | 666815 | Bdellovibrio sp. qaytius chromosome, complete genome | blastn | 13827 | 287 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. qaytius | ||
| 4200335 | 4200335 | PRJNA293022_P_NODE_19944_length_319_cov_1.637037_g19207_i0 | PRJNA293022 | 19944 | 319 | 1.637037 | 5.22214803 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 497 | 3.2e-136 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g19207 | i0 | 94.969 | 27.576802507837 | 318 | 15 | 99 | 1 | 2 | 319 | 1293747 | 1294063 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 8797 | 497 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 4887698 | 4887698 | PRJNA293022_P_NODE_65424_length_171_cov_2.221311_g64687_i0 | PRJNA293022 | 65424 | 171 | 2.221311 | 3.79844181 | Bacteriovorax | 146784 | Bacteria | Bacteria | 289 | 1e-73 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g64687 | i0 | 97.619 | 222.286549707602 | 168 | 4 | 98 | 0 | 3 | 170 | 1662493 | 1662326 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 38011 | 289 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 6750874 | 6750874 | PRJNA293022_P_NODE_20166_length_317_cov_2.410448_g19429_i0 | PRJNA293022 | 20166 | 317 | 2.410448 | 7.64112016 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 276 | 1.62e-69 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g19429 | i0 | 82.5 | 112.296529968454 | 320 | 50 | 99 | 4 | 3 | 317 | 3448357 | 3448039 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 35598 | 276 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 9301386 | 9301386 | PRJNA293022_P_NODE_50368_length_196_cov_2.278912_g49631_i0 | PRJNA293022 | 50368 | 196 | 2.278912 | 4.46666752 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 335 | 1.5e-87 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g49631 | i0 | 97.927 | 175.040816326531 | 193 | 4 | 98 | 0 | 3 | 195 | 699733 | 699925 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 34308 | 335 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 9301586 | 9301586 | PRJNA293022_P_NODE_8288_length_497_cov_3.821429_g7563_i0 | PRJNA293022 | 8288 | 497 | 3.821429 | 18.99250213 | Pseudobdellovibrio sp. HCB154 | 3386277 | Bacteria | Bacteria | 446 | 1.91e-120 | NTclustered | gi|2872995934|gb|CP176530.1| | 3386277 | g7563 | i0 | 86.019 | 435.233400402414 | 422 | 52 | 84 | 6 | 2 | 420 | 699883 | 700300 | Pseudobdellovibrio sp. HCB154 chromosome, complete genome | blastn | 216311 | 446 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio sp. HCB154 | ||
| 11262894 | 11262894 | PRJNA293022_P_NODE_56789_length_185_cov_0.882353_g56052_i0 | PRJNA293022 | 56789 | 185 | 0.882353 | 1.63235305 | Bacteriovorax | 146784 | Bacteria | Bacteria | 339 | 1.08e-88 | NTclustered | gi|459219260|gb|KC480587.1| | 960 | g56052 | i0 | 100 | 102.027027027027 | 183 | 0 | 99 | 0 | 1 | 183 | 188 | 6 | Bacteriovorax stolpii strain CWDS-2 16S ribosomal RNA gene, partial sequence | blastn | 18875 | 339 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 12538176 | 12538176 | PRJNA293022_P_NODE_27830_length_267_cov_1.211009_g27093_i0 | PRJNA293022 | 27830 | 267 | 1.211009 | 3.23339403 | Bdellovibrio | 958 | Bacteria | Bacteria | 250 | 8.07e-62 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g27093 | i0 | 87.33 | 74.6966292134831 | 221 | 25 | 83 | 3 | 2 | 222 | 779039 | 779256 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 19944 | 250 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 13127068 | 13127068 | PRJNA293022_P_NODE_33691_length_241_cov_1.520833_g32954_i0 | PRJNA293022 | 33691 | 241 | 1.520833 | 3.66520753 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 385 | 1.88e-102 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g32954 | i0 | 95.816 | 85.9668049792531 | 239 | 9 | 99 | 1 | 1 | 239 | 816802 | 816565 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 20718 | 385 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 13813098 | 13813098 | PRJNA293022_P_NODE_45511_length_207_cov_1.088608_g44774_i0 | PRJNA293022 | 45511 | 207 | 1.088608 | 2.25341856 | root | 1 | Root_unresolved | Root_unresolved | 172 | 1.33e-38 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g44774 | i0 | 83.246 | 64.1980676328502 | 191 | 28 | 91 | 4 | 1 | 189 | 815739 | 815551 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 13289 | 172 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 14402144 | 14402144 | PRJNA293022_P_NODE_24412_length_286_cov_1.683544_g23675_i0 | PRJNA293022 | 24412 | 286 | 1.683544 | 4.81493584 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 327 | 3.919999999999999e-85 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g23675 | i0 | 87.676 | 85.972027972028 | 284 | 32 | 99 | 2 | 3 | 285 | 861302 | 861583 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 24588 | 327 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 14402400 | 14402400 | PRJNA293022_P_NODE_75132_length_164_cov_1.417391_g74395_i0 | PRJNA293022 | 75132 | 164 | 1.417391 | 2.32452124 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 257 | 2.7e-64 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g74395 | i0 | 95.122 | 137.085365853659 | 164 | 6 | 99 | 1 | 1 | 162 | 512033 | 511870 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 22482 | 257 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 15087311 | 15087311 | PRJNA293022_P_NODE_43332_length_212_cov_1.398773_g42595_i0 | PRJNA293022 | 43332 | 212 | 1.398773 | 2.96539876 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 128 | 3.0099999999999997e-25 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g42595 | i0 | 78.744 | 32.3018867924528 | 207 | 32 | 95 | 10 | 5 | 205 | 610576 | 610376 | Bdellovibrio bacteriovorus W, complete genome | blastn | 6848 | 128 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 15676110 | 15676110 | PRJNA293022_P_NODE_59093_length_181_cov_1.151515_g58356_i0 | PRJNA293022 | 59093 | 181 | 1.151515 | 2.08424215 | uncultured Pseudobdellovibrionaceae bacterium | 269677 | Bacteria | Bacteria | 287 | 3.87e-73 | NTclustered | gi|1409356697|gb|MH537953.1| | 269677 | g58356 | i0 | 95.531 | 98.7569060773481 | 179 | 8 | 99 | 0 | 3 | 181 | 56 | 234 | Uncultured Pseudobdellovibrionaceae bacterium clone Bde2A 16S ribosomal RNA gene, partial sequence | blastn | 17875 | 287 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | uncultured Pseudobdellovibrionaceae bacterium | |||
| 19499179 | 19499179 | PRJNA293022_P_NODE_37016_length_229_cov_4.527778_g36279_i0 | PRJNA293022 | 37016 | 229 | 4.527778 | 10.36861162 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 411 | 2.9299999999999996e-110 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g36279 | i0 | 99.556 | 88.6593886462882 | 225 | 1 | 98 | 0 | 3 | 227 | 512199 | 511975 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 20303 | 411 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 22049635 | 22049635 | PRJNA293022_P_NODE_21358_length_307_cov_158.596899_g20621_i0 | PRJNA293022 | 21358 | 307 | 158.596899 | 486.89247993 | uncultured Bdellovibrio sp. | 239744 | Bacteria | Bacteria | 449 | 8.69e-122 | NTclustered | gi|380837387|gb|JN866303.1| | 239744 | g20621 | i0 | 97.701 | 121.514657980456 | 261 | 6 | 85 | 0 | 45 | 305 | 3 | 263 | Uncultured Bdellovibrio sp. clone B3_30_117 16S ribosomal RNA gene, partial sequence | blastn | 37305 | 449 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | uncultured Bdellovibrio sp. | ||
| 26631049 | 26631049 | PRJNA293022_P_NODE_74541_length_165_cov_0.896552_g73804_i0 | PRJNA293022 | 74541 | 165 | 0.896552 | 1.4793108 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 95.1 | 6.22e-22 | NR | MEN0059642.1 | 28201 | g73804 | i0 | 81.8 | 4.87272727272727 | 55 | 10 | 100 | 0 | 1 | 165 | 59 | 113 | MEN0059642.1 MBL fold metallo-hydrolase [Bdellovibrio sp.] | diamond | 804 | 95.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 30611195 | 30611195 | PRJNA293022_P_NODE_44493_length_209_cov_1.893750_g43756_i0 | PRJNA293022 | 44493 | 209 | 1.89375 | 3.9579375 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 40 | 0.0213 | NR | MAE52118.1 | 2024841 | g43756 | i0 | 43.9 | 0.588516746411483 | 41 | 23 | 58.9 | 0 | 190 | 68 | 1 | 41 | MAE52118.1 entericidin [Micavibrio sp.] | diamond | 123 | 40 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 31528028 | 31528028 | PRJNA293022_P_NODE_32156_length_247_cov_1.040404_g31419_i0 | PRJNA293022 | 32156 | 247 | 1.040404 | 2.56979788 | Bdellovibrio sp. 22V | 3044166 | Bacteria | Bacteria | 55.8 | 8.24e-7 | NR | WP_284605945.1 | 3044166 | g31419 | i0 | 39.7 | 0.88663967611336 | 73 | 42 | 86.2 | 1 | 247 | 35 | 78 | 150 | WP_284605945.1 hypothetical protein [Bdellovibrio sp. 22V] | diamond | 219 | 55.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. 22V |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;