contig_metadata
24 rows where bioproject = "PRJNA293022", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 373252 | 373252 | PRJNA293022_P_NODE_32521_length_245_cov_3.265306_g31784_i0 | PRJNA293022 | 32521 | 245 | 3.265306 | 7.9999997 | Bryobacterales bacterium F-183 | 2802972 | Bacteria | Bacteria | 449 | 6.710000000000001e-122 | NTclustered | gi|2131941663|dbj|AP025252.1| | 2802972 | g31784 | i0 | 100 | 105.048979591837 | 243 | 0 | 99 | 0 | 1 | 243 | 634970 | 635212 | Bryobacterales bacterium F-183 DNA, nearly complete genome | blastn | 25737 | 449 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium F-183 | ||||
| 373467 | 373467 | PRJNA293022_P_NODE_82241_length_155_cov_2.424528_g81504_i0 | PRJNA293022 | 82241 | 155 | 2.424528 | 3.7580184 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 263 | 5.41e-66 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g81504 | i0 | 97.403 | 146.432258064516 | 154 | 4 | 99 | 0 | 2 | 155 | 3298766 | 3298919 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 22697 | 263 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 2923869 | 2923869 | PRJNA293022_P_NODE_19383_length_324_cov_1.076364_g18646_i0 | PRJNA293022 | 19383 | 324 | 1.076364 | 3.48741936 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 534 | 2.4799999999999998e-147 | NTclustered | gi|31789464|gb|AY281356.1| | 171953 | g18646 | i0 | 96.584 | 103.104938271605 | 322 | 11 | 99 | 0 | 1 | 322 | 11325 | 11646 | Uncultured Acidobacteria bacterium clone 41b15 genomic sequence | blastn | 33406 | 534 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 2924132 | 2924132 | PRJNA293022_P_NODE_75423_length_164_cov_0.904348_g74686_i0 | PRJNA293022 | 75423 | 164 | 0.904348 | 1.48313072 | Bryobacterales bacterium F-183 | 2802972 | Bacteria | Bacteria | 283 | 4.46e-72 | NTclustered | gi|2131941663|dbj|AP025252.1| | 2802972 | g74686 | i0 | 98.148 | 0.98780487804878 | 162 | 3 | 99 | 0 | 1 | 162 | 3159125 | 3158964 | Bryobacterales bacterium F-183 DNA, nearly complete genome | blastn | 162 | 283 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium F-183 | ||||
| 4200309 | 4200309 | PRJNA293022_P_NODE_13684_length_386_cov_37.136499_g12947_i0 | PRJNA293022 | 13684 | 386 | 37.136499 | 143.34688614 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 551 | 2.979999999999999e-152 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g12947 | i0 | 92.487 | 120.269430051813 | 386 | 27 | 99 | 2 | 2 | 386 | 3558485 | 3558101 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 46424 | 551 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 8026723 | 8026723 | PRJNA293022_P_NODE_68687_length_168_cov_1.403361_g67950_i0 | PRJNA293022 | 68687 | 168 | 1.403361 | 2.35764648 | Sulfidibacter corallicola | 2818388 | Bacteria | Bacteria | 106 | 1.07e-18 | NTclustered | gi|2013124720|gb|CP071793.1| | 2818388 | g67950 | i0 | 100 | 65.5297619047619 | 57 | 0 | 34 | 0 | 110 | 166 | 3680211 | 3680267 | Sulfidibacter corallicola strain M133 chromosome, complete genome | blastn | 11009 | 106 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Acanthopleuribacterales | Acanthopleuribacteraceae | Sulfidibacter | Sulfidibacter corallicola | ||
| 9301281 | 9301281 | PRJNA293022_P_NODE_2208_length_895_cov_20.773050_g1767_i0 | PRJNA293022 | 2208 | 895 | 20.77305 | 185.9187975 | Bryobacterales bacterium F-183 | 2802972 | Bacteria | Bacteria | 1266 | 0 | NTclustered | gi|2131941663|dbj|AP025252.1| | 2802972 | g1767 | i0 | 92.214 | 90.7575418994413 | 899 | 63 | 100 | 5 | 1 | 895 | 634491 | 635386 | Bryobacterales bacterium F-183 DNA, nearly complete genome | blastn | 81228 | 1266 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium F-183 | ||||
| 9301318 | 9301318 | PRJNA293022_P_NODE_31148_length_251_cov_1.811881_g30411_i0 | PRJNA293022 | 31148 | 251 | 1.811881 | 4.54782131 | Luteitalea sp. TBR-22 | 2802971 | Bacteria | Bacteria | 438 | 1.4899999999999995e-118 | NTclustered | gi|2131947417|dbj|AP024452.2| | 2802971 | g30411 | i0 | 98.4 | 314.274900398406 | 250 | 2 | 99 | 2 | 1 | 249 | 641862 | 641614 | Vicinamibacteria bacterium TBR-22 DNA, complete genome | blastn | 78883 | 438 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea sp. TBR-22 | ||
| 9301471 | 9301471 | PRJNA293022_P_NODE_67148_length_169_cov_1.583333_g66411_i0 | PRJNA293022 | 67148 | 169 | 1.583333 | 2.67583277 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 267 | 4.63e-67 | NTclustered | gi|2874254027|emb|OY970352.1| | 171953 | g66411 | i0 | 95.238 | 19.3786982248521 | 168 | 8 | 99 | 0 | 2 | 169 | 2365856 | 2365689 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 | blastn | 3275 | 267 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 11851894 | 11851894 | PRJNA293022_P_NODE_29630_length_258_cov_2.167464_g28893_i0 | PRJNA293022 | 29630 | 258 | 2.167464 | 5.59205712 | Bryobacterales bacterium F-183 | 2802972 | Bacteria | Bacteria | 468 | 1.97e-127 | NTclustered | gi|2131941663|dbj|AP025252.1| | 2802972 | g28893 | i0 | 99.609 | 98.3604651162791 | 256 | 1 | 99 | 0 | 3 | 258 | 634239 | 633984 | Bryobacterales bacterium F-183 DNA, nearly complete genome | blastn | 25377 | 468 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium F-183 | ||||
| 13127065 | 13127065 | PRJNA293022_P_NODE_32931_length_244_cov_1.389744_g32194_i0 | PRJNA293022 | 32931 | 244 | 1.389744 | 3.39097536 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 315 | 2.5399999999999992e-81 | NTclustered | gi|2874254108|emb|OY970193.1| | 171953 | g32194 | i0 | 90.123 | 65.9344262295082 | 243 | 22 | 99 | 2 | 3 | 244 | 1689581 | 1689340 | MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 | blastn | 16088 | 315 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 13127074 | 13127074 | PRJNA293022_P_NODE_34431_length_238_cov_2.497354_g33694_i0 | PRJNA293022 | 34431 | 238 | 2.497354 | 5.94370252 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 348 | 2.4300000000000005e-91 | NTclustered | gi|2874254027|emb|OY970352.1| | 171953 | g33694 | i0 | 93.22 | 123.680672268908 | 236 | 16 | 99 | 0 | 1 | 236 | 2367424 | 2367659 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 | blastn | 29436 | 348 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 18225074 | 18225074 | PRJNA293022_P_NODE_64155_length_173_cov_1.653226_g63418_i0 | PRJNA293022 | 64155 | 173 | 1.653226 | 2.86008098 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 89.8 | 1.11e-13 | NTclustered | gi|2874253700|emb|OY969426.1| | 2651171 | g63418 | i0 | 86.585 | 1.00578034682081 | 82 | 9 | 47 | 2 | 8 | 88 | 3464150 | 3464230 | MAG: Thermoanaerobaculia bacterium isolate MFD02979.bin.c.1 genome assembly, chromosome: 1 | blastn | 174 | 89.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 19499228 | 19499228 | PRJNA293022_P_NODE_48396_length_200_cov_2.920530_g47659_i0 | PRJNA293022 | 48396 | 200 | 2.92053 | 5.84106 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 158 | 3.58e-34 | NTclustered | gi|2874253950|emb|OY970275.1| | 171953 | g47659 | i0 | 81.592 | 215.695 | 201 | 28 | 98 | 8 | 5 | 200 | 4267432 | 4267628 | MAG: uncultured Acidobacteriota bacterium isolate MFD03399.bin.c.2 genome assembly, chromosome: 1 | blastn | 43139 | 158 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 21461511 | 21461511 | PRJNA293022_P_NODE_62137_length_176_cov_1.622047_g61400_i0 | PRJNA293022 | 62137 | 176 | 1.622047 | 2.85480272 | root | 1 | Root_unresolved | Root_unresolved | 139 | 1.11e-28 | NTclustered | gi|2874253769|emb|OY969716.1| | 171953 | g61400 | i0 | 88.793 | 91.75 | 116 | 10 | 66 | 3 | 60 | 175 | 4151591 | 4151479 | MAG: uncultured Acidobacteriota bacterium isolate MFD04540.bin.c.1 genome assembly, chromosome: 1 | blastn | 16148 | 139 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 22049981 | 22049981 | PRJNA293022_P_NODE_79798_length_162_cov_0.734513_g79061_i0 | PRJNA293022 | 79798 | 162 | 0.734513 | 1.18991106 | Luteitalea pratensis | 1855912 | Bacteria | Bacteria | 202 | 1.26e-47 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g79061 | i0 | 89.809 | 194.648148148148 | 157 | 16 | 97 | 0 | 6 | 162 | 653608 | 653764 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 31533 | 202 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 23325245 | 23325245 | PRJNA293022_P_NODE_21399_length_307_cov_4.205426_g20662_i0 | PRJNA293022 | 21399 | 307 | 4.205426 | 12.91065782 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 375 | 1.5e-99 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g20662 | i0 | 88.852 | 186.508143322476 | 305 | 34 | 99 | 0 | 1 | 305 | 3559019 | 3559323 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 57258 | 375 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 24011569 | 24011569 | PRJNA293022_P_NODE_19079_length_326_cov_4.072202_g18342_i0 | PRJNA293022 | 19079 | 326 | 4.072202 | 13.27537852 | Bacteria | 2 | Bacteria | Bacteria | 196 | 1.34e-45 | NTclustered | gi|1015624362|gb|AH012920.2| | 171953 | g18342 | i0 | 87.952 | 53.5092024539877 | 166 | 20 | 51 | 0 | 92 | 257 | 30170 | 30335 | Uncultured Acidobacteria bacterium clone 46h5 hypothetical protein, putative O-linked GlcNAc transferase, putative two-component response regulator, hypothetical protein, putative penicillin-resistance DD-carboxypeptidase, putative glycosyl transferase, hypothetical protein, conserved hypothetical protein, hypothetical protein, putative MaoC family dehydratase, putative D-3-phosphoglycerate dehydrogenase, putative magnesium and cobalt transport protein, putative phosphatidyl-glycerophosphatase, putative 2-methylthioadenine synthetase, hypothetical protein, putative glutamine cyclotransferase, and hypothetical protein genes, complete cds; 5S ribosomal RNA, 23S ribosomal RNA, tRNA-Ala, tRNA-Met, tRNA-Ile, and 16S ribosomal RNA genes, complete sequence; and hypothetical protein genes, complete cds | blastn | 17444 | 196 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24599273 | 24599273 | PRJNA293022_P_NODE_1420_length_1063_cov_19.014793_g1070_i0 | PRJNA293022 | 1420 | 1063 | 19.014793 | 202.12724959 | Bryobacterales bacterium | 2026791 | Bacteria | Bacteria | 1325 | 0 | NTclustered | gi|2874253826|emb|OY969810.1| | 2026791 | g1070 | i0 | 89.229 | 102.952022577611 | 1077 | 93 | 100 | 19 | 1 | 1063 | 6660252 | 6659185 | MAG: Bryobacterales bacterium isolate MFD04967.bin.c.1 genome assembly, chromosome: 1 | blastn | 109438 | 1325 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium | ||||
| 24599418 | 24599418 | PRJNA293022_P_NODE_50100_length_197_cov_1.195946_g49363_i0 | PRJNA293022 | 50100 | 197 | 1.195946 | 2.35601362 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 207 | 3.44e-49 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g49363 | i0 | 85.859 | 106.081218274112 | 198 | 25 | 99 | 2 | 1 | 196 | 3559246 | 3559050 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 20898 | 207 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 29442338 | 29442338 | PRJNA293022_P_NODE_79630_length_162_cov_0.920354_g78893_i0 | PRJNA293022 | 79630 | 162 | 0.920354 | 1.49097348 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 41.2 | 0.0407 | NR | HEX6202390.1 | 2651171 | g78893 | i0 | 47.2 | 0.666666666666667 | 36 | 19 | 66.7 | 0 | 136 | 29 | 137 | 172 | HEX6202390.1 hypothetical protein [Thermoanaerobaculia bacterium] | diamond | 108 | 41.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 29789746 | 29789746 | PRJNA293022_P_NODE_50951_length_195_cov_1.801370_g50214_i0 | PRJNA293022 | 50951 | 195 | 1.80137 | 3.5126715 | Candidatus Solibacter sp. | 2068625 | Bacteria | Bacteria | 41.2 | 0.0308 | NR | MEO8369265.1 | 2068625 | g50214 | i0 | 56 | 0.384615384615385 | 25 | 11 | 38.5 | 0 | 172 | 98 | 8 | 32 | MEO8369265.1 hypothetical protein [Candidatus Solibacter sp.] | diamond | 75 | 41.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Solibacteraceae | Candidatus Solibacter | Candidatus Solibacter sp. | ||
| 31749211 | 31749211 | PRJNA293022_P_NODE_78397_length_162_cov_1.831858_g77660_i0 | PRJNA293022 | 78397 | 162 | 1.831858 | 2.96760996 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 96.7 | 1.5699999999999994e-23 | NR | HYZ82997.1 | 2212468 | g77660 | i0 | 78.4 | 0.944444444444444 | 51 | 11 | 94.4 | 0 | 8 | 160 | 1 | 51 | HYZ82997.1 peroxiredoxin [Bryobacteraceae bacterium] | diamond | 153 | 96.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 32572158 | 32572158 | PRJNA293022_P_NODE_56079_length_186_cov_1.394161_g55342_i0 | PRJNA293022 | 56079 | 186 | 1.394161 | 2.59313946 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 40.8 | 0.0293 | NR | HYN10246.1 | 2910147 | g55342 | i0 | 43.9 | 0.661290322580645 | 41 | 23 | 66.1 | 0 | 4 | 126 | 29 | 69 | HYN10246.1 PadR family transcriptional regulator [Vicinamibacterales bacterium] | diamond | 123 | 40.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;