RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA293022", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

  • Fungi · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA293022 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1648112 1648112 PRJNA293022_P_NODE_58482_length_182_cov_1.172932_g57745_i0 PRJNA293022 58482 182 1.172932 2.13473624 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 283 5.04e-72   NTclustered gi|2522768008|gb|OR162445.1| 646526 g57745 i0 95 42.543956043956 180 9 99 0 1 180 3460 3281 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7743 283 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
4200298 4200298 PRJNA293022_P_NODE_10024_length_452_cov_3.464020_g9291_i0 PRJNA293022 10024 452 3.46402 15.6573704 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 444 6.18e-120   NTclustered gi|2522768008|gb|OR162445.1| 646526 g9291 i0 84.615 7.15265486725664 455 60 99 10 2 450 2203 1753 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3233 444 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
5476646 5476646 PRJNA293022_P_NODE_16725_length_349_cov_1.216667_g15988_i0 PRJNA293022 16725 349 1.216667 4.24616783 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 102 3.23e-17   NTclustered gi|448278458|gb|KC137554.1| 1289055 g15988 i0 83.636 0.315186246418338 110 16 32 1 191 300 2962 2855 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 110 102 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
14402133 14402133 PRJNA293022_P_NODE_21472_length_307_cov_1.589147_g20735_i0 PRJNA293022 21472 307 1.589147 4.87868129 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 272 2.02e-68   NTclustered gi|2522768008|gb|OR162445.1| 646526 g20735 i0 86.585 0.801302931596091 246 33 80 0 3 248 2767 3012 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 246 272 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
28084833 28084833 PRJNA293022_P_NODE_67645_length_169_cov_0.866667_g66908_i0 PRJNA293022 67645 169 0.866667 1.46466723 Pseudoloma neurophilia 146866 Fungi Fungi 44.3 0.00175   NR KRH92703.1 146866 g66908 i0 40.4 2.0414201183432 52 25 92.3 1 164 9 54 99 KRH92703.1 putative transposable element [Pseudoloma neurophilia] diamond 345 44.7 0.991051454138702 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;