RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA293022", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA293022 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9987888 9987888 PRJNA293022_P_NODE_66068_length_170_cov_2.735537_g65331_i0 PRJNA293022 66068 170 2.735537 4.6504129 Powellomycetaceae 1134080 Fungi Fungi 80.5 6.52e-11   NTclustered gi|362409876|gb|JN941012.1| 1126246 g65331 i0 76.744 70.5117647058824 172 22 99 13 2 169 697 854 Powellomyces sp. 28S ribosomal RNA (LSU) gene, partial sequence blastn 11987 80.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces sp. DAOM 226231
18224977 18224977 PRJNA293022_P_NODE_44875_length_208_cov_2.094340_g44138_i0 PRJNA293022 44875 208 2.09434 4.3562272 Lacustromyces hiemalis 110070 Fungi Fungi 228 2.819999999999999e-55   NTclustered gi|1866582727|gb|MT730902.1| 110070 g44138 i0 89.888 80.2259615384615 178 16 85 2 31 207 4807 4631 Lacustromyces hiemalis isolate JEL0938 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16687 228 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Lacustromyces Lacustromyces hiemalis
31401623 31401623 PRJNA293022_P_NODE_79376_length_162_cov_0.920354_g78639_i0 PRJNA293022 79376 162 0.920354 1.49097348 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 75.5 2.09e-14   NR KAH9246990.1 1357716 g78639 i0 97.2 0.666666666666667 36 1 66.7 0 159 52 173 208 KAH9246990.1 hypothetical protein BASA81_015421 [Batrachochytrium salamandrivorans] diamond 108 75.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;