contig_metadata
7 rows where bioproject = "PRJNA293022", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7437603 | 7437603 | PRJNA293022_P_NODE_26706_length_273_cov_1.218750_g25969_i0 | PRJNA293022 | 26706 | 273 | 1.21875 | 3.3271875 | Candidatus Phytoplasma | 33926 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|171853496|emb|AM422018.1| | 59748 | g25969 | i0 | 96.774 | 0.227106227106227 | 31 | 1 | 11 | 0 | 48 | 78 | 524783 | 524753 | Candidatus Phytoplasma australiense complete genome | blastn | 62 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Candidatus Phytoplasma | Candidatus Phytoplasma australiense | ||
| 11262792 | 11262792 | PRJNA293022_P_NODE_18089_length_335_cov_15.758741_g17352_i0 | PRJNA293022 | 18089 | 335 | 15.758741 | 52.79178235 | Mycoplasma | 2093 | Bacteria | Bacteria | 169 | 3.01e-37 | NTclustered | gi|323574443|emb|FQ790233.1| | 708248 | g17352 | i0 | 80.738 | 32.755223880597 | 244 | 23 | 68 | 19 | 28 | 254 | 312508 | 312272 | Mycoplasma suis KI3806 complete genome | blastn | 10973 | 169 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma suis | ||
| 12538290 | 12538290 | PRJNA293022_P_NODE_74890_length_164_cov_2.113043_g74153_i0 | PRJNA293022 | 74890 | 164 | 2.113043 | 3.46539052 | Mycoplasma | 2093 | Bacteria | Bacteria | 91.6 | 2.9e-14 | NTclustered | gi|335353881|dbj|AB638408.1| | 29501 | g74153 | i0 | 100 | 23.6829268292683 | 49 | 0 | 30 | 0 | 114 | 162 | 72 | 24 | Mycoplasma haemofelis DNA, 16S-23S rRNA internal transcribed spacer, complete sequence, strain: Gandai2 | blastn | 3884 | 91.6 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma haemofelis | ||
| 16950783 | 16950783 | PRJNA293022_P_NODE_67454_length_169_cov_0.866667_g66717_i0 | PRJNA293022 | 67454 | 169 | 0.866667 | 1.46466723 | Metamycoplasma faucium | 56142 | Bacteria | Bacteria | 265 | 1.66e-66 | NTclustered | gi|2708452869|gb|CP088155.1| | 56142 | g66717 | i0 | 95.21 | 1.97633136094675 | 167 | 8 | 99 | 0 | 3 | 169 | 344106 | 344272 | Metamycoplasma faucium strain UMCG-MFM1 chromosome, complete genome | blastn | 334 | 265 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium | |||
| 18911122 | 18911122 | PRJNA293022_P_NODE_34295_length_239_cov_1.084211_g33558_i0 | PRJNA293022 | 34295 | 239 | 1.084211 | 2.59126429 | Mycoplasma | 2093 | Bacteria | Bacteria | 137 | 8.78e-36 | NR | WP_015726045.1 | 29501 | g33558 | i0 | 89.9 | 9.85355648535565 | 79 | 8 | 99.2 | 0 | 237 | 1 | 315 | 393 | WP_015726045.1 molecular chaperone DnaK [Mycoplasma haemofelis] | diamond | 2355 | 137 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma haemofelis | ||
| 28842532 | 28842532 | PRJNA293022_P_NODE_57968_length_183_cov_1.007463_g57231_i0 | PRJNA293022 | 57968 | 183 | 1.007463 | 1.84365729 | Candidatus Mycoplasma haematohominis | 1494318 | Bacteria | Bacteria | 68.9 | 8.54e-12 | NR | WP_216082890.1 | 1494318 | g57231 | i0 | 57.6 | 1.91803278688525 | 59 | 24 | 95.1 | 1 | 178 | 5 | 160 | 218 | WP_216082890.1 HD domain-containing protein [Candidatus Mycoplasma haematohominis] | diamond | 351 | 68.9 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Candidatus Mycoplasma haematohominis | ||
| 30295795 | 30295795 | PRJNA293022_P_NODE_43032_length_213_cov_0.823171_g42295_i0 | PRJNA293022 | 43032 | 213 | 0.823171 | 1.75335423 | Candidatus Mycoplasma haematohominis | 1494318 | Bacteria | Bacteria | 97.8 | 1.2799999999999999e-23 | NR | WP_216083123.1 | 1494318 | g42295 | i0 | 65.7 | 1.95774647887324 | 70 | 24 | 98.6 | 0 | 211 | 2 | 33 | 102 | WP_216083123.1 50S ribosomal protein L6 [Candidatus Mycoplasma haematohominis] | diamond | 417 | 97.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Candidatus Mycoplasma haematohominis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;