RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA293022", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA293022 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8026604 8026604 PRJNA293022_P_NODE_3967_length_695_cov_2.408669_g3357_i0 PRJNA293022 3967 695 2.408669 16.74024955 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.019   NTclustered gi|1145259111|ref|XM_012907390.2| 5854 g3357 i0 96.97 0.141007194244604 33 0 5 1 408 440 3334 3365 Plasmodium reichenowi hypothetical protein partial mRNA blastn 98 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
17637422 17637422 PRJNA293022_P_NODE_77234_length_163_cov_0.912281_g76497_i0 PRJNA293022 77234 163 0.912281 1.48701803 root 1 Root_unresolved Root_unresolved 54.7 0.004   NTclustered gi|1145263100|ref|XM_012909776.2| 5854 g76497 i0 96.97 0.595092024539877 33 0 20 1 1 33 2529 2498 Plasmodium reichenowi hypothetical protein partial mRNA blastn 97 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
21461461 21461461 PRJNA293022_P_NODE_37877_length_227_cov_1.348315_g37140_i0 PRJNA293022 37877 227 1.348315 3.06067505 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 86.1 1.99e-12   NTclustered gi|833484291|ref|XM_012911757.1| 5866 g37140 i0 96.154 10.1145374449339 52 2 23 0 151 202 279 228 Babesia bigemina 60S ribosomal L22e protein, putative partial mRNA blastn 2296 86.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
31134156 31134156 PRJNA293022_P_NODE_73735_length_165_cov_0.896552_g72998_i0 PRJNA293022 73735 165 0.896552 1.4793108 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82.8 6.42e-18   NR KAJ1605490.1 195482 g72998 i0 72.2 3.96363636363636 54 15 98.2 0 163 2 144 197 KAJ1605490.1 putative 40S ribosomal subunit protein S9 [Cryptosporidium canis] diamond 654 82.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium canis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;