RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA293022" and tax_clade = "Metamonada"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA293022 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6750970 6750970 PRJNA293022_P_NODE_45886_length_206_cov_1.318471_g45149_i0 PRJNA293022 45886 206 1.318471 2.71605026 Tritrichomonas augusta 5725 Parabasalia other_Eukaryota 289 1.26e-73   NTclustered gi|2274983416|gb|OP038912.1| 5725 g45149 i0 92.233 17.4902912621359 206 12 99 4 1 204 1195 992 Tritrichomonas augusta isolate T1 large subunit ribosomal RNA gene, partial sequence blastn 3603 289 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas augusta
13127080 13127080 PRJNA293022_P_NODE_35931_length_233_cov_1.673913_g35194_i0 PRJNA293022 35931 233 1.673913 3.90021729 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 139 2.06e-39   NR KAJ4458814.1 342808 g35194 i0 86.8 36.2575107296137 76 10 97.9 0 4 231 1 76 KAJ4458814.1 putative 60S ribosomal protein L10 [Paratrimastix pyriformis] diamond 8448 139 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27485021 27485021 PRJNA293022_P_NODE_67843_length_169_cov_0.866667_g67106_i0 PRJNA293022 67843 169 0.866667 1.46466723 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 67.8 2.02e-11   NR KAK2953536.1 2049346 g67106 i0 45.3 0.940828402366864 53 29 94.1 0 160 2 103 155 KAK2953536.1 putative Glycogen synthase kinase-3 beta [Blattamonas nauphoetae] diamond 159 67.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
27832244 27832244 PRJNA293022_P_NODE_24264_length_287_cov_1.294118_g23527_i0 PRJNA293022 24264 287 1.294118 3.71411866 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 87 6.23e-19   NR XP_068360038.1 1144522 g23527 i0 50.6 0.909407665505226 87 43 90.9 0 14 274 91 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 261 87 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32729411 32729411 PRJNA293022_P_NODE_64880_length_172_cov_1.674797_g64143_i0 PRJNA293022 64880 172 1.674797 2.88065084 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 101 2.3499999999999994e-23   NR KAJ4458739.1 342808 g64143 i0 83.9 12.6976744186047 56 9 97.7 0 5 172 189 244 KAJ4458739.1 putative 60S ribosomal protein L5 [Paratrimastix pyriformis] diamond 2184 101 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;