RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA293022", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 3 ✖

bioproject 1

  • PRJNA293022 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27660641 27660641 PRJNA293022_P_NODE_61564_length_177_cov_1.460938_g60827_i0 PRJNA293022 61564 177 1.460938 2.58586026 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 96.3 2.07e-23   NR KAL1504107.1 97485 g60827 i0 88 17.8983050847458 50 6 84.7 0 25 174 1 50 KAL1504107.1 hypothetical protein AB1Y20_010517 [Prymnesium parvum] diamond 3168 96.3 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
29239257 29239257 PRJNA293022_P_NODE_59569_length_180_cov_1.572519_g58832_i0 PRJNA293022 59569 180 1.572519 2.8305341999999998 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87 3.39e-18   NR KAL1527885.1 97485 g58832 i0 61 3.76666666666667 59 23 98.3 0 177 1 189 247 KAL1527885.1 hypothetical protein AB1Y20_009261 [Prymnesium parvum] diamond 678 87 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
30863994 30863994 PRJNA293022_P_NODE_75814_length_164_cov_0.904348_g75077_i0 PRJNA293022 75814 164 0.904348 1.48313072 Prymnesium parvum 97485 Haptophyta other_Eukaryota 44.7 0.00271   NR KAL1529263.1 97485 g75077 i0 57.1 0.51219512195122 28 12 51.2 0 132 49 2601 2628 KAL1529263.1 hypothetical protein AB1Y20_000217 [Prymnesium parvum] diamond 84 44.7 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;