contig_metadata
9 rows where bioproject = "PRJNA293022", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 373463 | 373463 | PRJNA293022_P_NODE_79681_length_162_cov_0.920354_g78944_i0 | PRJNA293022 | 79681 | 162 | 0.920354 | 1.49097348 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 220 | 3.49e-53 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g78944 | i0 | 91.358 | 8.50617283950617 | 162 | 12 | 99 | 2 | 1 | 161 | 172427 | 172267 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 1378 | 220 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5476941 | 5476941 | PRJNA293022_P_NODE_75845_length_164_cov_0.904348_g75108_i0 | PRJNA293022 | 75845 | 164 | 0.904348 | 1.48313072 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 257 | 2.7e-64 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g75108 | i0 | 95.092 | 42.7317073170732 | 163 | 8 | 99 | 0 | 2 | 164 | 1592852 | 1592690 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 7008 | 257 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10577310 | 10577310 | PRJNA293022_P_NODE_60709_length_178_cov_2.131783_g59972_i0 | PRJNA293022 | 60709 | 178 | 2.131783 | 3.79457374 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 279 | 6.35e-71 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g59972 | i0 | 95.429 | 11.6685393258427 | 175 | 8 | 98 | 0 | 4 | 178 | 2076169 | 2075995 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 2077 | 279 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 11262874 | 11262874 | PRJNA293022_P_NODE_49049_length_199_cov_1.393333_g48312_i0 | PRJNA293022 | 49049 | 199 | 1.393333 | 2.77273267 | Gemmatimonas | 173479 | Bacteria | Bacteria | 287 | 4.35e-73 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g48312 | i0 | 92.893 | 14.608040201005 | 197 | 14 | 99 | 0 | 1 | 197 | 1107 | 911 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 2907 | 287 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 14402243 | 14402243 | PRJNA293022_P_NODE_47912_length_201_cov_3.059211_g47175_i0 | PRJNA293022 | 47912 | 201 | 3.059211 | 6.14901411 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 309 | 9.39e-80 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g47175 | i0 | 94.5 | 78.4776119402985 | 200 | 11 | 99 | 0 | 2 | 201 | 2075191 | 2074992 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 15774 | 309 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 18224851 | 18224851 | PRJNA293022_P_NODE_16095_length_356_cov_1.335505_g15358_i0 | PRJNA293022 | 16095 | 356 | 1.335505 | 4.7543978 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 486 | 7.79e-133 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g15358 | i0 | 91.977 | 194.733146067416 | 349 | 24 | 97 | 4 | 10 | 356 | 2076174 | 2076520 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 69325 | 486 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 20774645 | 20774645 | PRJNA293022_P_NODE_17197_length_344_cov_1.637288_g16460_i0 | PRJNA293022 | 17197 | 344 | 1.637288 | 5.63227072 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 102 | 3.19e-17 | NTclustered | gi|2531976023|emb|OY282356.1| | 2026742 | g16460 | i0 | 91.026 | 222.226744186047 | 78 | 4 | 22 | 3 | 1 | 76 | 758 | 682 | MAG: Gemmatimonadota bacterium genome assembly, chromosome: 1 | blastn | 76446 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 24599494 | 24599494 | PRJNA293022_P_NODE_67060_length_169_cov_1.716667_g66323_i0 | PRJNA293022 | 67060 | 169 | 1.716667 | 2.90116723 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 126 | 8.2e-25 | NTclustered | gi|2893358411|emb|OZ220702.1| | 2910168 | g66323 | i0 | 85.484 | 98.0177514792899 | 124 | 14 | 72 | 4 | 4 | 125 | 1324200 | 1324079 | MAG: Longimicrobiales bacterium isolate 5c038fdb-8e0b-4cbd-9550-43be1afc0bbf genome assembly, chromosome: 1 | blastn | 16565 | 126 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 30453577 | 30453577 | PRJNA293022_P_NODE_22413_length_300_cov_1.645418_g21676_i0 | PRJNA293022 | 22413 | 300 | 1.645418 | 4.936254 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 43.1 | 0.0482 | NR | HEX5634159.1 | 2448054 | g21676 | i0 | 33.3 | 0.66 | 66 | 39 | 66 | 1 | 4 | 201 | 74 | 134 | HEX5634159.1 cytochrome c oxidase assembly protein [Gemmatimonadales bacterium] | diamond | 198 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;