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contig_metadata

25 rows where bioproject = "PRJNA293022", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 25 ✖

tax_clade 1

  • Discoba · 25 ✖

bioproject 1

  • PRJNA293022 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
373304 373304 PRJNA293022_P_NODE_48101_length_201_cov_1.480263_g47364_i0 PRJNA293022 48101 201 1.480263 2.97532863 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 303 4.37e-78   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g47364 i0 94.416 137.383084577114 197 11 98 0 1 197 4369 4173 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27614 303 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
373391 373391 PRJNA293022_P_NODE_70281_length_167_cov_1.322034_g69544_i0 PRJNA293022 70281 167 1.322034 2.20779678 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 163 6.2e-36   NTclustered gi|2095499288|gb|MZ461463.1| 5763 g69544 i0 84.756 9.66467065868263 164 24 98 1 2 165 1898 1736 Naegleria fowleri isolate AY27 mitochondrion, complete genome blastn 1614 163 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
2923885 2923885 PRJNA293022_P_NODE_23483_length_292_cov_2.773663_g22746_i0 PRJNA293022 23483 292 2.773663 8.09909596 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 359 1.42e-94   NTclustered gi|11466174|ref|NC_002573.1| 5762 g22746 i0 95.175 40.0753424657534 228 10 78 1 4 230 1820 1593 Naegleria gruberi mitochondrion, complete genome blastn 11702 359 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4200549 4200549 PRJNA293022_P_NODE_67584_length_169_cov_0.866667_g66847_i0 PRJNA293022 67584 169 0.866667 1.46466723 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 254 3.6e-63   NTclustered gi|290997441|ref|XM_002681244.1| 5762 g66847 i0 94.512 0.970414201183432 164 9 97 0 4 167 1709 1546 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55628), partial mRNA blastn 164 254 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
5476972 5476972 PRJNA293022_P_NODE_79605_length_162_cov_0.920354_g78868_i0 PRJNA293022 79605 162 0.920354 1.49097348 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 139 1.01e-28   NTclustered gi|290986251|ref|XM_002675792.1| 5762 g78868 i0 91.176 0.62962962962963 102 9 63 0 4 105 832 933 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_68819), partial mRNA blastn 102 139 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8026508 8026508 PRJNA293022_P_NODE_20147_length_317_cov_3.059701_g19410_i0 PRJNA293022 20147 317 3.059701 9.69925217 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 569 6.629999999999998e-158   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g19410 i0 99.054 63.5205047318612 317 3 100 0 1 317 3410 3094 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20136 569 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
9987928 9987928 PRJNA293022_P_NODE_76868_length_163_cov_1.359649_g76131_i0 PRJNA293022 76868 163 1.359649 2.21622787 Naegleria 5761 Heterolobosea other_Eukaryota 287 3.42e-73   NTclustered gi|38606345|gb|AY376153.1| 5762 g76131 i0 98.765 93.2883435582822 162 0 99 1 2 163 659 818 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 15206 287 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9987944 9987944 PRJNA293022_P_NODE_8068_length_504_cov_2.536264_g7344_i0 PRJNA293022 8068 504 2.536264 12.78277056 Naegleria 5761 Heterolobosea other_Eukaryota 778 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g7344 i0 99.076 85.8571428571429 433 4 86 0 71 503 1179 747 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 43272 778 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
10577397 10577397 PRJNA293022_P_NODE_7469_length_522_cov_21.689218_g6750_i0 PRJNA293022 7469 522 21.689218 113.21771796 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 955 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g6750 i0 99.808 33.2950191570881 520 1 99 0 3 522 2338 2857 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 17380 955 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
11851963 11851963 PRJNA293022_P_NODE_44230_length_210_cov_1.031056_g43493_i0 PRJNA293022 44230 210 1.031056 2.1652176 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 316 5.92e-82   NTclustered gi|290999169|ref|XM_002682107.1| 5762 g43493 i0 96.354 4.41428571428571 192 7 91 0 17 208 436 245 Naegleria gruberi 40S ribosomal protein S16 (NAEGRDRAFT_35163), partial mRNA blastn 927 316 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11852115 11852115 PRJNA293022_P_NODE_76750_length_163_cov_1.692982_g76013_i0 PRJNA293022 76750 163 1.692982 2.75956066 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 292 7.35e-75   NTclustered gi|11466174|ref|NC_002573.1| 5762 g76013 i0 99.379 85.2822085889571 161 1 99 0 1 161 2574 2414 Naegleria gruberi mitochondrion, complete genome blastn 13901 292 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13813031 13813031 PRJNA293022_P_NODE_14171_length_380_cov_1.824773_g13434_i0 PRJNA293022 14171 380 1.824773 6.9341374 Naegleria 5761 Heterolobosea other_Eukaryota 693 0   NTclustered gi|38606344|gb|AY376152.1| 51634 g13434 i0 99.735 26.5921052631579 378 1 99 0 1 378 507 130 Naegleria australiensis isolate 7857 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 10105 693 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
16362254 16362254 PRJNA293022_P_NODE_68553_length_168_cov_1.731092_g67816_i0 PRJNA293022 68553 168 1.731092 2.90823456 Naegleria 5761 Heterolobosea other_Eukaryota 307 2.73e-79   NTclustered gi|2618963742|gb|OR769034.1| 5762 g67816 i0 100 36.0119047619048 166 0 99 0 3 168 5134 5299 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 6050 307 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18225177 18225177 PRJNA293022_P_NODE_8015_length_505_cov_3.464912_g7291_i0 PRJNA293022 8015 505 3.464912 17.4978056 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 913 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g7291 i0 99.404 31.4356435643564 503 3 99 0 3 505 4078 4580 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 15875 913 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
18911116 18911116 PRJNA293022_P_NODE_31755_length_248_cov_4.597990_g31018_i0 PRJNA293022 31755 248 4.59799 11.4030152 Naegleria 5761 Heterolobosea other_Eukaryota 449 6.81e-122   NTclustered gi|2618963742|gb|OR769034.1| 5762 g31018 i0 99.593 10.0645161290323 246 1 99 0 1 246 5792 5547 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2496 449 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19499293 19499293 PRJNA293022_P_NODE_65236_length_171_cov_4.098361_g64499_i0 PRJNA293022 65236 171 4.098361 7.00819731 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 313 5.95e-81   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g64499 i0 100 21.0116959064327 169 0 99 0 3 171 2839 3007 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 3593 313 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
20774658 20774658 PRJNA293022_P_NODE_20257_length_316_cov_3.651685_g19520_i0 PRJNA293022 20257 316 3.651685 11.5393246 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 531 3.12e-146   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g19520 i0 97.134 13.0727848101266 314 9 99 0 1 314 3914 3601 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4131 531 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
20774663 20774663 PRJNA293022_P_NODE_21077_length_310_cov_1.532567_g20340_i0 PRJNA293022 21077 310 1.532567 4.7509577 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 553 6.509999999999998e-153   NTclustered gi|11466174|ref|NC_002573.1| 5762 g20340 i0 99.026 142.438709677419 308 3 99 0 1 308 903 596 Naegleria gruberi mitochondrion, complete genome blastn 44156 553 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22049818 22049818 PRJNA293022_P_NODE_5798_length_588_cov_3.033395_g5101_i0 PRJNA293022 5798 588 3.033395 17.8363626 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 793 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g5101 i0 91.141 6.75510204081633 587 48 99 3 1 585 2575 1991 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3972 793 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
24599591 24599591 PRJNA293022_P_NODE_82560_length_154_cov_2.695238_g81823_i0 PRJNA293022 82560 154 2.695238 4.15066652 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 254 3.23e-63   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g81823 i0 96.711 57.1428571428571 152 5 99 0 3 154 1877 2028 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8800 254 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
26884529 26884529 PRJNA293022_P_NODE_75641_length_164_cov_0.904348_g74904_i0 PRJNA293022 75641 164 0.904348 1.48313072 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 67.8 4.04e-13   NR XP_044569047.1 5763 g74904 i0 86.4 0.804878048780488 44 6 80.5 0 159 28 47 90 XP_044569047.1 uncharacterized protein FDP41_007511 [Naegleria fowleri] diamond 132 67.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28053240 28053240 PRJNA293022_P_NODE_77145_length_163_cov_0.912281_g76408_i0 PRJNA293022 77145 163 0.912281 1.48701803 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 69.7 2.45e-12   NR XP_002679221.1 5762 g76408 i0 70.8 0.883435582822086 48 13 86.5 1 141 1 211 258 XP_002679221.1 uncharacterized protein NAEGRDRAFT_65473 [Naegleria gruberi] diamond 144 69.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28860169 28860169 PRJNA293022_P_NODE_76028_length_164_cov_0.904348_g75291_i0 PRJNA293022 76028 164 0.904348 1.48313072 Naegleria 5761 Heterolobosea other_Eukaryota 48.9 7.68e-6   NR XP_044560524.1 5763 g75291 i0 77.8 0.98780487804878 27 6 49.4 0 130 50 49 75 XP_044560524.1 uncharacterized protein FDP41_005138 [Naegleria fowleri] diamond 162 48.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29127099 29127099 PRJNA293022_P_NODE_72469_length_166_cov_0.888889_g71732_i0 PRJNA293022 72469 166 0.888889 1.47555574 Acrasis kona 1008807 Heterolobosea other_Eukaryota 93.6 1.29e-20   NR KAL0487406.1 1008807 g71732 i0 74.1 0.975903614457831 54 14 97.6 0 5 166 327 380 KAL0487406.1 serine/threonine-protein phosphatase [Acrasis kona] diamond 162 93.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30927462 30927462 PRJNA293022_P_NODE_79054_length_162_cov_0.920354_g78317_i0 PRJNA293022 79054 162 0.920354 1.49097348 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 77 5.26e-15   NR XP_002675677.1 5762 g78317 i0 67.9 0.981481481481482 53 16 98.1 1 160 2 115 166 XP_002675677.1 uncharacterized protein NAEGRDRAFT_69018 [Naegleria gruberi] diamond 159 77 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;