RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA293022", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA293022 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4200328 4200328 PRJNA293022_P_NODE_1904_length_955_cov_13.633554_g1496_i0 PRJNA293022 1904 955 13.633554 130.2004407 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 837 0   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g1496 i0 82.902 466.457591623037 965 132 99 31 2 949 3680914 3681862 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 445467 837 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
8026503 8026503 PRJNA293022_P_NODE_18987_length_327_cov_2.708633_g18250_i0 PRJNA293022 18987 327 2.708633 8.85722991 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 255 2.18e-63   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g18250 i0 81.024 106.238532110092 332 53 99 8 1 326 3680704 3680377 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 34740 255 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
18224856 18224856 PRJNA293022_P_NODE_17375_length_342_cov_2.866894_g16638_i0 PRJNA293022 17375 342 2.866894 9.80477748 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 303 8.08e-78   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g16638 i0 84.762 446.684210526316 315 35 90 12 1 309 597631 597324 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 152766 303 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;