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contig_metadata

28 rows where bioproject = "PRJNA290839" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 28 ✖

bioproject 1

  • PRJNA290839 · 28 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8026201 8026201 PRJNA290839_P_NODE_427_length_395_cov_1.093168_g406_i0 PRJNA290839 427 395 1.093168 4.3180136 root 1 Root_unresolved Root_unresolved 213 2.77e-64   NR XP_004344078.1 1257118 g406 i0 78.6 9.80506329113924 131 28 99.5 0 1 393 190 320 XP_004344078.1 Sadenosyl-L-homocysteine hydrolase, putative [Acanthamoeba castellanii str. Neff] diamond 3873 214 0.995327102803738 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14401864 14401864 PRJNA290839_P_NODE_1312_length_248_cov_0.868571_g1291_i0 PRJNA290839 1312 248 0.868571 2.15405608 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 110 7.470000000000001e-26   NR XP_012749557.1 1410327 g1291 i0 70.7 3.96774193548387 82 24 99.2 0 247 2 483 564 XP_012749557.1 hypothetical protein SAMD00019534_106680 [Acytostelium subglobosum LB1] diamond 984 110 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
16950295 16950295 PRJNA290839_P_NODE_254_length_534_cov_1.648590_g233_i0 PRJNA290839 254 534 1.64859 8.8034706 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 269 4.43e-82   NR XP_004337289.1 1257118 g233 i0 81 21.0337078651685 168 32 94.4 0 505 2 4 171 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 11232 270 0.996296296296296 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23324956 23324956 PRJNA290839_P_NODE_1599_length_242_cov_1.846154_g1578_i0 PRJNA290839 1599 242 1.846154 4.46769268 Polysphondylium violaceum 133409 Evosea other_Eukaryota 138 4.2499999999999997e-38   NR KAF2078123.1 133409 g1578 i0 75 4.68595041322314 80 20 99.2 0 2 241 2 81 KAF2078123.1 hypothetical protein CYY_000594 [Polysphondylium violaceum] diamond 1134 138 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
26852933 26852933 PRJNA290839_P_NODE_301_length_489_cov_1.329327_g280_i0 PRJNA290839 301 489 1.329327 6.50040903 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 81.6 2.86e-15   NR XP_012750870.1 1410327 g280 i0 30.5 0.785276073619632 128 85 77.9 2 477 97 140 264 XP_012750870.1 hypothetical protein SAMD00019534_094910 [Acytostelium subglobosum LB1] diamond 384 81.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
27028564 27028564 PRJNA290839_P_NODE_242_length_548_cov_2.120000_g221_i0 PRJNA290839 242 548 2.12 11.6176 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 282 2.37e-93   NR XP_004341437.1 1257118 g221 i0 73.6 11.956204379562 182 48 99.6 0 548 3 3 184 XP_004341437.1 ribosomal proteins l2, RNA binding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 6552 282 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27217980 27217980 PRJNA290839_P_NODE_1522_length_244_cov_0.906433_g1501_i0 PRJNA290839 1522 244 0.906433 2.21169652 root 1 Root_unresolved Root_unresolved 144 2.86e-38   NR XP_641054.1 352472 g1501 i0 82.7 34.6475409836066 81 14 99.6 0 244 2 39 119 XP_641054.1 CTP synthase [Dictyostelium discoideum AX4] diamond 8454 145 0.993103448275862 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27232199 27232199 PRJNA290839_P_NODE_1323_length_247_cov_0.896552_g1302_i0 PRJNA290839 1323 247 0.896552 2.21448344 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 43.5 0.021   NR XP_012756014.1 1410327 g1302 i0 33.3 0.765182186234818 63 41 76.5 1 229 41 192 253 XP_012756014.1 hypothetical protein SAMD00019534_040550 [Acytostelium subglobosum LB1] diamond 189 43.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
27327109 27327109 PRJNA290839_P_NODE_1163_length_250_cov_0.881356_g1142_i0 PRJNA290839 1163 250 0.881356 2.20339 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 54.3 1.75e-6   NR XP_004339568.1 1257118 g1142 i0 38.2 0.816 68 36 81.6 1 11 214 131 192 XP_004339568.1 START domain containing protein [Acanthamoeba castellanii str. Neff] diamond 204 54.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27358835 27358835 PRJNA290839_P_NODE_1403_length_246_cov_0.895954_g1382_i0 PRJNA290839 1403 246 0.895954 2.20404684 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 110 2.33e-26   NR XP_004333651.1 1257118 g1382 i0 63.8 0.975609756097561 80 29 97.6 0 6 245 44 123 XP_004333651.1 coronin3, putative [Acanthamoeba castellanii str. Neff] diamond 240 110 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27408104 27408104 PRJNA290839_P_NODE_1203_length_249_cov_0.886364_g1182_i0 PRJNA290839 1203 249 0.886364 2.20704636 Eumycetozoa 142796 Evosea other_Eukaryota 85.1 4.58e-17   NR XP_020432443.1 670386 g1182 i0 51.9 1.89156626506024 79 36 92.8 1 246 16 315 393 XP_020432443.1 Putative serine protease [Heterostelium album PN500] diamond 471 85.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27502772 27502772 PRJNA290839_P_NODE_1043_length_252_cov_0.871508_g1022_i0 PRJNA290839 1043 252 0.871508 2.19620016 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87 1.3e-19   NR XP_003283951.1 5786 g1022 i0 50.6 6.73809523809524 83 40 98.8 1 251 3 18 99 XP_003283951.1 uncharacterized protein DICPUDRAFT_45162 [Dictyostelium purpureum] diamond 1698 87 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
27800858 27800858 PRJNA290839_P_NODE_1504_length_244_cov_0.912281_g1483_i0 PRJNA290839 1504 244 0.912281 2.22596564 Cavenderia fasciculata 261658 Evosea other_Eukaryota 110 3.8e-26   NR XP_004357938.1 261658 g1483 i0 66.3 0.983606557377049 80 27 98.4 0 242 3 15 94 XP_004357938.1 inositol-3-phosphate synthase [Cavenderia fasciculata] diamond 240 110 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
27832237 27832237 PRJNA290839_P_NODE_1204_length_249_cov_0.886364_g1183_i0 PRJNA290839 1204 249 0.886364 2.20704636 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 102 5.44e-23   NR XP_012754660.1 1410327 g1183 i0 60.3 2.81927710843373 78 31 94 0 236 3 690 767 XP_012754660.1 hypothetical protein SAMD00019534_057150 [Acytostelium subglobosum LB1] diamond 702 102 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28084814 28084814 PRJNA290839_P_NODE_1305_length_248_cov_0.880000_g1284_i0 PRJNA290839 1305 248 0.88 2.1824 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 56.6 5.23e-7   NR KAH3732736.1 1580589 g1284 i0 43.4 1.00403225806452 83 42 98 2 243 1 1207 1286 KAH3732736.1 Ubiquitinconjugating enzyme subfamily protein [Pelomyxa schiedti] diamond 249 56.6 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28179365 28179365 PRJNA290839_P_NODE_1226_length_249_cov_0.880682_g1205_i0 PRJNA290839 1226 249 0.880682 2.19289818 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.1 0.00626   NR XP_004339445.1 1257118 g1205 i0 46.8 0.566265060240964 47 25 56.6 0 249 109 8 54 XP_004339445.1 uncharacterized protein ACA1_061730 [Acanthamoeba castellanii str. Neff] diamond 141 45.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28495497 28495497 PRJNA290839_P_NODE_207_length_600_cov_1.426945_g186_i0 PRJNA290839 207 600 1.426945 8.56167 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 286 8.36e-93   NR PRP84373.1 1890364 g186 i0 71.9 2.975 199 53 98.5 2 597 7 29 226 PRP84373.1 hypothetical protein PROFUN_08238 [Planoprotostelium fungivorum] diamond 1785 286 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28828546 28828546 PRJNA290839_P_NODE_1148_length_250_cov_0.881356_g1127_i0 PRJNA290839 1148 250 0.881356 2.20339 Acytosteliaceae 2058183 Evosea other_Eukaryota 117 2.15e-28   NR XP_020432601.1 670386 g1127 i0 70.4 3.924 81 24 97.2 0 3 245 233 313 XP_020432601.1 major vault protein [Heterostelium album PN500] diamond 981 117 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
29284508 29284508 PRJNA290839_P_NODE_409_length_403_cov_2.333333_g388_i0 PRJNA290839 409 403 2.333333 9.40333199 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 161 1.4299999999999999e-47   NR XP_004334896.1 1257118 g388 i0 61.8 0.975186104218362 131 48 96.8 2 13 402 1 130 XP_004334896.1 ribosomal protein L6, putative [Acanthamoeba castellanii str. Neff] diamond 393 161 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29617706 29617706 PRJNA290839_P_NODE_810_length_285_cov_1.462264_g789_i0 PRJNA290839 810 285 1.462264 4.1674524 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 3.34e-6   NR XP_001737126.1 370354 g789 i0 33.3 3.95789473684211 93 58 93.7 1 9 275 15 107 XP_001737126.1 profilin, putative [Entamoeba dispar SAW760] diamond 1128 53.1 0.994350282485876 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
29631721 29631721 PRJNA290839_P_NODE_490_length_368_cov_1.054237_g469_i0 PRJNA290839 490 368 1.054237 3.87959216 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 94 6.21e-20   NR AFD36233.1 5755 g469 i0 60.3 0.635869565217391 78 31 63.6 0 234 1 61 138 AFD36233.1 protein kinase C4, partial [Acanthamoeba castellanii] diamond 234 94 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30295781 30295781 PRJNA290839_P_NODE_812_length_285_cov_1.160377_g791_i0 PRJNA290839 812 285 1.160377 3.30707445 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 124 6.149999999999999e-31   NR XP_004348339.1 1257118 g791 i0 69.6 1.78947368421053 92 27 95.8 1 12 284 1 92 XP_004348339.1 H(+)-transporting atpase family protein [Acanthamoeba castellanii str. Neff] diamond 510 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31053933 31053933 PRJNA290839_P_NODE_1395_length_246_cov_0.901734_g1374_i0 PRJNA290839 1395 246 0.901734 2.21826564 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 85.5 3.52e-17   NR PRP89372.1 1890364 g1374 i0 59.5 0.902439024390244 74 30 90.2 0 222 1 36 109 PRP89372.1 hypothetical protein PROFUN_01235 [Planoprotostelium fungivorum] diamond 222 85.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31622758 31622758 PRJNA290839_P_NODE_1396_length_246_cov_0.901734_g1375_i0 PRJNA290839 1396 246 0.901734 2.21826564 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 106 1.26e-24   NR KAH3742895.1 1580589 g1375 i0 80.3 2.63414634146341 66 13 80.5 0 47 244 503 568 KAH3742895.1 dynamin family GTPase [Pelomyxa schiedti] diamond 648 106 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31749195 31749195 PRJNA290839_P_NODE_697_length_307_cov_0.991453_g676_i0 PRJNA290839 697 307 0.991453 3.04376071 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 134 3.94e-34   NR XP_004335836.1 1257118 g676 i0 55.7 1.03583061889251 106 41 99.7 2 307 2 46 149 XP_004335836.1 uncharacterized protein ACA1_076760 [Acanthamoeba castellanii str. Neff] diamond 318 134 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32209931 32209931 PRJNA290839_P_NODE_458_length_383_cov_1.412903_g437_i0 PRJNA290839 458 383 1.412903 5.41141849 Eumycetozoa 142796 Evosea other_Eukaryota 116 1.05e-29   NR XP_004366125.1 261658 g437 i0 59.6 4.40208877284595 94 38 73.6 0 375 94 4 97 XP_004366125.1 LIM-type zinc finger-containing protein [Cavenderia fasciculata] diamond 1686 116 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
32697738 32697738 PRJNA290839_P_NODE_500_length_365_cov_1.705479_g479_i0 PRJNA290839 500 365 1.705479 6.22499835 Cavenderia fasciculata 261658 Evosea other_Eukaryota 109 6.06e-25   NR XP_004359266.1 261658 g479 i0 45.6 2.04657534246575 125 58 98.6 4 1 360 233 352 XP_004359266.1 Physaropepsin [Cavenderia fasciculata] diamond 747 109 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
32792117 32792117 PRJNA290839_P_NODE_660_length_316_cov_0.962963_g639_i0 PRJNA290839 660 316 0.962963 3.04296308 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 100 3.3e-22   NR XP_012752347.1 1410327 g639 i0 49.1 2.0126582278481 106 46 98.7 3 314 3 285 384 XP_012752347.1 hypothetical protein SAMD00019534_078530, partial [Acytostelium subglobosum LB1] diamond 636 100 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;