contig_metadata
7 rows where bioproject = "PRJNA289590", tax_phylum = "Nitrospirota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15087070 | 15087070 | PRJNA289590_P_NODE_7572_length_345_cov_1.956081_g7348_i0 | PRJNA289590 | 7572 | 345 | 1.956081 | 6.74847945 | Nitrospira | 1234 | Bacteria | Bacteria | 582 | 9.36e-162 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g7348 | i0 | 97.118 | 253.521739130435 | 347 | 7 | 100 | 2 | 1 | 345 | 1278778 | 1278433 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 87465 | 584 | 0.996575342465753 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 16949710 | 16949710 | PRJNA289590_P_NODE_13434_length_248_cov_2.266332_g13210_i0 | PRJNA289590 | 13434 | 248 | 2.266332 | 5.62050336 | Nitrospirales bacterium | 2358460 | Bacteria | Bacteria | 231 | 2.68e-56 | NTclustered | gi|2814788353|emb|OY820905.2| | 2358460 | g13210 | i0 | 84.362 | 99.8790322580645 | 243 | 31 | 97 | 6 | 8 | 247 | 3094211 | 3094449 | MAG: Nitrospirales bacterium isolate 78038947-5669-4080-b1cf-e9f6117fe586 genome assembly, chromosome: 1 | blastn | 24770 | 231 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospirales bacterium | ||||
| 16949867 | 16949867 | PRJNA289590_P_NODE_20934_length_194_cov_1.075862_g20710_i0 | PRJNA289590 | 20934 | 194 | 1.075862 | 2.08717228 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 300 | 5.420000000000001e-77 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g20710 | i0 | 95.699 | 85.9020618556701 | 186 | 8 | 96 | 0 | 1 | 186 | 201763 | 201578 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 16665 | 300 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 18910808 | 18910808 | PRJNA289590_P_NODE_15555_length_229_cov_1.111111_g15331_i0 | PRJNA289590 | 15555 | 229 | 1.111111 | 2.54444419 | Nitrospira | 1234 | Bacteria | Bacteria | 414 | 2.26e-111 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g15331 | i0 | 99.559 | 474.960698689956 | 227 | 1 | 99 | 0 | 1 | 227 | 1278153 | 1278379 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 108766 | 414 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 26648435 | 26648435 | PRJNA289590_P_NODE_12721_length_256_cov_1.444444_g12497_i0 | PRJNA289590 | 12721 | 256 | 1.444444 | 3.69777664 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 104 | 5.24e-24 | NR | MCA9474030.1 | 70125 | g12497 | i0 | 65.1 | 3.90234375 | 83 | 22 | 97.3 | 2 | 251 | 3 | 3 | 78 | MCA9474030.1 NERD domain-containing protein [Nitrospira sp.] | diamond | 999 | 104 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 26725573 | 26725573 | PRJNA289590_P_NODE_17501_length_215_cov_0.939759_g17277_i0 | PRJNA289590 | 17501 | 215 | 0.939759 | 2.02048185 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 85.1 | 3.1e-17 | NR | MCA9474063.1 | 70125 | g17277 | i0 | 63.4 | 0.990697674418605 | 71 | 25 | 97.7 | 1 | 2 | 211 | 348 | 418 | MCA9474063.1 AAA family ATPase [Nitrospira sp.] | diamond | 213 | 85.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30660515 | 30660515 | PRJNA289590_P_NODE_18173_length_210_cov_1.602484_g17949_i0 | PRJNA289590 | 18173 | 210 | 1.602484 | 3.3652164 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 90.5 | 3.63e-19 | NR | MCA9474063.1 | 70125 | g17949 | i0 | 59.4 | 5.91428571428571 | 69 | 28 | 98.6 | 0 | 209 | 3 | 243 | 311 | MCA9474063.1 AAA family ATPase [Nitrospira sp.] | diamond | 1242 | 90.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;