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contig_metadata

14 rows where bioproject = "PRJNA289590" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA289590 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8025752 8025752 PRJNA289590_P_NODE_19087_length_205_cov_0.878205_g18863_i0 PRJNA289590 19087 205 0.878205 1.80032025 Armillaria mellea 47429 Fungi Fungi 357 3.3899999999999996e-94   NTclustered gi|239740618|gb|FJ875693.1| 47429 g18863 i0 98.049 102.053658536585 205 4 100 0 1 205 1454 1658 Armillaria mellea strain CMW 3961 large subunit ribosomal RNA gene, partial sequence blastn 20921 357 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Armillaria Armillaria mellea
9987584 9987584 PRJNA289590_P_NODE_30828_length_162_cov_1.690265_g30604_i0 PRJNA289590 30828 162 1.690265 2.7382293 Agaricomycetes 155619 Fungi Fungi 298 1.57e-76   NTclustered gi|2576441|gb|AF026587.1|AF026587 40491 g30604 i0 100 99.4197530864197 161 0 99 0 2 162 1271 1431 Stereum annosum 18S ribosomal RNA gene, partial sequence blastn 16106 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Stereaceae Xylobolus Xylobolus annosus
9987595 9987595 PRJNA289590_P_NODE_5688_length_410_cov_2.072022_g5464_i0 PRJNA289590 5688 410 2.072022 8.4952902 Microbotryomycetes 162481 Fungi Fungi 676 0   NTclustered gi|1358186634|gb|MH047191.1| 5278 g5464 i0 96.79 103.226829268293 405 13 99 0 3 407 3718 4122 Leucosporidium scottii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 42323 676 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium scottii
11850903 11850903 PRJNA289590_P_NODE_10050_length_292_cov_1.497942_g9826_i0 PRJNA289590 10050 292 1.497942 4.37399064 Fungi 4751 Fungi Fungi 146 2.66e-41   NR KAH9993630.1 517384 g9826 i0 73 7.97260273972603 89 24 91.4 0 290 24 23 111 KAH9993630.1 guanine nucleotide binding protein beta subunit [Russula vinacea] diamond 2328 147 0.993197278911565 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Russulaceae Russula Russula vinacea
11851269 11851269 PRJNA289590_P_NODE_26070_length_169_cov_0.866667_g25846_i0 PRJNA289590 26070 169 0.866667 1.46466723 Filobasidium floriforme 5210 Fungi Fungi 130 6.34e-26   NTclustered gi|2185536376|ref|XM_046180702.1| 5210 g25846 i0 82.119 4.36094674556213 151 27 89 0 19 169 306 456 Filobasidium floriforme ribosomal protein L3-domain-containing protein (HD553DRAFT_317005), mRNA blastn 737 130 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
12537944 12537944 PRJNA289590_P_NODE_25690_length_170_cov_1.173554_g25466_i0 PRJNA289590 25690 170 1.173554 1.9950418 Fungi 4751 Fungi Fungi 309 7.64e-80   NTclustered gi|2724480650|gb|PP467489.1| 5315 g25466 i0 99.412 105.994117647059 170 1 100 0 1 170 6512 6343 Ganoderma lucidum strain Red Reishi No.6 intergenic spacer 2, partial sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S large subunit ribosomal RNA gene, intergenic spacer 1, 5S ribosomal RNA gene, intergenic spacer 2, 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S large subunit ribosomal RNA gene, intergenic spacer 1, 5S ribosomal RNA gene, and intergenic spacer 2, complete sequence; and 18S small subunit ribosomal RNA gene, partial sequence blastn 18019 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma lucidum
13812757 13812757 PRJNA289590_P_NODE_16391_length_222_cov_3.543353_g16167_i0 PRJNA289590 16391 222 3.543353 7.86624366 Fungi 4751 Fungi Fungi 405 1.31e-108   NTclustered gi|2576865988|gb|OR548146.1| 133752 g16167 i0 99.55 100 222 1 100 0 1 222 345 124 Puccinia rufipes voucher HGUP21176 large subunit ribosomal RNA gene, partial sequence blastn 22200 405 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia rufipes
14401423 14401423 PRJNA289590_P_NODE_18632_length_207_cov_1.689873_g18408_i0 PRJNA289590 18632 207 1.689873 3.49803711 Xylobolus sp. 101 OA-2013 1321930 Fungi Fungi 333 5.779999999999999e-87   NTclustered gi|480327092|gb|JX535115.1| 1321930 g18408 i0 96.078 103.285024154589 204 8 99 0 1 204 1857 2060 Xylobolus sp. 101 OA-2013 large subunit ribosomal RNA gene, partial sequence blastn 21380 333 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Stereaceae Xylobolus Xylobolus sp. 101 OA-2013
19498205 19498205 PRJNA289590_P_NODE_11056_length_276_cov_5.770925_g10832_i0 PRJNA289590 11056 276 5.770925 15.927753 Rhodotorula glutinis 5535 Fungi Fungi 494 3.51e-135   NTclustered gi|225134685|gb|FJ345357.1| 5535 g10832 i0 98.913 73.6449275362319 276 3 100 0 1 276 3656 3931 Rhodotorula glutinis strain ATCC 16726 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20326 494 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
19498428 19498428 PRJNA289590_P_NODE_21156_length_193_cov_1.055556_g20932_i0 PRJNA289590 21156 193 1.055556 2.03722308 Rhodotorula glutinis 5535 Fungi Fungi 342 8.819999999999999e-90   NTclustered gi|225134685|gb|FJ345357.1| 5535 g20932 i0 98.462 103.279792746114 195 1 100 1 1 193 2191 2385 Rhodotorula glutinis strain ATCC 16726 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 19933 342 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
20185443 20185443 PRJNA289590_P_NODE_19896_length_200_cov_1.331126_g19672_i0 PRJNA289590 19896 200 1.331126 2.662252 Rhodotorula 5533 Fungi Fungi 370 4.22e-98   NTclustered gi|1102645436|gb|KY109006.1| 5288 g19672 i0 100 100 200 0 100 0 1 200 236 37 Rhodotorula diobovata culture CBS:11071 large subunit ribosomal RNA gene, partial sequence blastn 20000 370 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula diobovata
20774136 20774136 PRJNA289590_P_NODE_27577_length_167_cov_0.881356_g27353_i0 PRJNA289590 27577 167 0.881356 1.47186452 Malassezia restricta 76775 Fungi Fungi 244 2.15e-60   NTclustered gi|1546634876|ref|XM_027629097.1| 76775 g27353 i0 93.333 0.988023952095808 165 11 99 0 3 167 939 775 Malassezia restricta dynamin-binding protein (MRET_2470), partial mRNA blastn 165 244 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24598731 24598731 PRJNA289590_P_NODE_26080_length_169_cov_0.866667_g25856_i0 PRJNA289590 26080 169 0.866667 1.46466723 Malassezia arunalokei 1514897 Fungi Fungi 294 2.12e-75   NTclustered gi|2692937071|ref|NC_086476.1| 1514897 g25856 i0 98.225 7.46745562130178 169 2 100 1 1 169 15583 15750 Malassezia arunalokei culture CBS:13387 strain CBS13387 mitochondrion, complete genome blastn 1262 294 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei
32729384 32729384 PRJNA289590_P_NODE_26120_length_169_cov_0.866667_g25896_i0 PRJNA289590 26120 169 0.866667 1.46466723 Fomitiporia mediterranea MF3/22 694068 Fungi Fungi 75.1 5.03e-14   NR XP_007265867.1 694068 g25896 i0 79.6 0.869822485207101 49 8 83.4 1 143 3 44 92 XP_007265867.1 uncharacterized protein FOMMEDRAFT_167489 [Fomitiporia mediterranea MF3/22] diamond 147 75.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Fomitiporia Fomitiporia mediterranea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;