contig_metadata
18 rows where bioproject = "PRJNA289590" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1647433 | 1647433 | PRJNA289590_P_NODE_2_length_26078_cov_14.641746_g1_i0 | PRJNA289590 | 2 | 26078 | 14.641746 | 3818.27452188 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 902 | 1.32e-290 | NR | WP_005034683.1 | 35839 | g1 | i0 | 70 | 2.9507630953294 | 690 | 201 | 7.9 | 2 | 2167 | 4233 | 1 | 685 | WP_005034683.1 flagellar biosynthesis protein FlhA [Holophaga foetida] | diamond | 76950 | 910 | 0.991208791208791 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Holophaga | Holophaga foetida | ||
| 13126183 | 13126183 | PRJNA289590_P_NODE_14071_length_242_cov_1.393782_g13847_i0 | PRJNA289590 | 14071 | 242 | 1.393782 | 3.37295244 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 80.5 | 1e-10 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g13847 | i0 | 88.06 | 1.55371900826446 | 67 | 8 | 28 | 0 | 51 | 117 | 2362876 | 2362810 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 376 | 80.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 13126185 | 13126185 | PRJNA289590_P_NODE_14111_length_242_cov_1.020725_g13887_i0 | PRJNA289590 | 14111 | 242 | 1.020725 | 2.4701545 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 353 | 5.34e-93 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g13887 | i0 | 94.714 | 100.028925619835 | 227 | 12 | 94 | 0 | 16 | 242 | 4651609 | 4651383 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 24207 | 353 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 26884509 | 26884509 | PRJNA289590_P_NODE_5661_length_411_cov_1.881215_g5437_i0 | PRJNA289590 | 5661 | 411 | 1.881215 | 7.73179365 | Terriglobales bacterium | 2282142 | Bacteria | Bacteria | 47.4 | 0.00546 | NR | HKR33070.1 | 2282142 | g5437 | i0 | 32.8 | 1.62773722627737 | 67 | 43 | 47.4 | 1 | 180 | 374 | 164 | 230 | HKR33070.1 PAS domain S-box protein [Terriglobales bacterium] | diamond | 669 | 47.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium | ||||
| 28481411 | 28481411 | PRJNA289590_P_NODE_27546_length_167_cov_0.881356_g27322_i0 | PRJNA289590 | 27546 | 167 | 0.881356 | 1.47186452 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 56.6 | 1.68e-7 | NR | MBW4032803.1 | 1978231 | g27322 | i0 | 57.1 | 5.22754491017964 | 49 | 21 | 88 | 0 | 21 | 167 | 244 | 292 | MBW4032803.1 M3 family metallopeptidase [Acidobacteriota bacterium] | diamond | 873 | 56.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 28779348 | 28779348 | PRJNA289590_P_NODE_14707_length_236_cov_0.834225_g14483_i0 | PRJNA289590 | 14707 | 236 | 0.834225 | 1.968771 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 93.6 | 1.5600000000000002e-21 | NR | MFM8393176.1 | 1978231 | g14483 | i0 | 74.1 | 0.686440677966102 | 54 | 14 | 68.6 | 0 | 2 | 163 | 160 | 213 | MFM8393176.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 162 | 93.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 28874159 | 28874159 | PRJNA289590_P_NODE_21108_length_193_cov_1.354167_g20884_i0 | PRJNA289590 | 21108 | 193 | 1.354167 | 2.61354231 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 65.1 | 3.68e-11 | NR | MEM7245756.1 | 1978231 | g20884 | i0 | 54.1 | 0.948186528497409 | 61 | 28 | 94.8 | 0 | 2 | 184 | 96 | 156 | MEM7245756.1 GNAT family N-acetyltransferase [Acidobacteriota bacterium] | diamond | 183 | 65.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 28874164 | 28874164 | PRJNA289590_P_NODE_24748_length_174_cov_1.664000_g24524_i0 | PRJNA289590 | 24748 | 174 | 1.664 | 2.89536 | Geothrix sp. | 1962974 | Bacteria | Bacteria | 87 | 3.24e-18 | NR | HJW44006.1 | 1962974 | g24524 | i0 | 71.9 | 0.982758620689655 | 57 | 16 | 98.3 | 0 | 173 | 3 | 236 | 292 | HJW44006.1 S28 family serine protease [Geothrix sp.] | diamond | 171 | 87 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. | ||
| 29473844 | 29473844 | PRJNA289590_P_NODE_23810_length_179_cov_1.600000_g23586_i0 | PRJNA289590 | 23810 | 179 | 1.6 | 2.864 | Candidatus Acidiferrales bacterium | 2952895 | Bacteria | Bacteria | 58.5 | 4.16e-8 | NR | HEX2711882.1 | 2952895 | g23586 | i0 | 45.9 | 1.02234636871508 | 61 | 30 | 97.2 | 1 | 176 | 3 | 81 | 141 | HEX2711882.1 hypothetical protein [Candidatus Acidiferrales bacterium] | diamond | 183 | 58.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Candidatus Acidiferrales | Candidatus Acidiferrales bacterium | ||||
| 29473851 | 29473851 | PRJNA289590_P_NODE_30990_length_162_cov_0.920354_g30766_i0 | PRJNA289590 | 30990 | 162 | 0.920354 | 1.49097348 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 72.4 | 4.4e-13 | NR | HEX5601181.1 | 2283092 | g30766 | i0 | 67.3 | 4.85185185185185 | 52 | 17 | 96.3 | 0 | 7 | 162 | 664 | 715 | HEX5601181.1 condensation domain-containing protein [Pyrinomonadaceae bacterium] | diamond | 786 | 72.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 30516486 | 30516486 | PRJNA289590_P_NODE_26673_length_168_cov_0.873950_g26449_i0 | PRJNA289590 | 26673 | 168 | 0.87395 | 1.468236 | Vicinamibacteria bacterium | 2793154 | Bacteria | Bacteria | 42 | 0.0254 | NR | HXK11049.1 | 2793154 | g26449 | i0 | 38 | 1.66071428571429 | 50 | 30 | 87.5 | 1 | 2 | 148 | 352 | 401 | HXK11049.1 hypothetical protein [Vicinamibacteria bacterium] | diamond | 279 | 42 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacteria bacterium | |||||
| 30737557 | 30737557 | PRJNA289590_P_NODE_25954_length_169_cov_0.866667_g25730_i0 | PRJNA289590 | 25954 | 169 | 0.866667 | 1.46466723 | Terriglobales bacterium | 2282142 | Bacteria | Bacteria | 63.9 | 4.49e-10 | NR | HEU5402244.1 | 2282142 | g25730 | i0 | 48.2 | 3.85207100591716 | 56 | 29 | 99.4 | 0 | 2 | 169 | 66 | 121 | HEU5402244.1 hypothetical protein [Terriglobales bacterium] | diamond | 651 | 63.9 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium | ||||
| 30832432 | 30832432 | PRJNA289590_P_NODE_26014_length_169_cov_0.866667_g25790_i0 | PRJNA289590 | 26014 | 169 | 0.866667 | 1.46466723 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 41.2 | 0.0493 | NR | MDE3136122.1 | 1978231 | g25790 | i0 | 57.1 | 0.621301775147929 | 35 | 15 | 62.1 | 0 | 62 | 166 | 365 | 399 | MDE3136122.1 oligopeptide:H+ symporter [Acidobacteriota bacterium] | diamond | 105 | 41.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 31085259 | 31085259 | PRJNA289590_P_NODE_3875_length_523_cov_4.360759_g3657_i0 | PRJNA289590 | 3875 | 523 | 4.360759 | 22.80676957 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 168 | 1.03e-47 | NR | MFN3326867.1 | 2212468 | g3657 | i0 | 71 | 1.19885277246654 | 107 | 31 | 61.4 | 0 | 342 | 22 | 1 | 107 | MFN3326867.1 hypothetical protein [Bryobacteraceae bacterium] | diamond | 627 | 168 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 31450779 | 31450779 | PRJNA289590_P_NODE_9116_length_309_cov_2.119231_g8892_i0 | PRJNA289590 | 9116 | 309 | 2.119231 | 6.54842379 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 55.8 | 1.89e-6 | NR | HXK61697.1 | 1978231 | g8892 | i0 | 61.4 | 1.78640776699029 | 44 | 17 | 42.7 | 0 | 299 | 168 | 1 | 44 | HXK61697.1 PKD domain-containing protein [Acidobacteriota bacterium] | diamond | 552 | 56.2 | 0.99288256227758 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 32129148 | 32129148 | PRJNA289590_P_NODE_1918_length_871_cov_6.378345_g1722_i0 | PRJNA289590 | 1918 | 871 | 6.378345 | 55.55538495 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 279 | 9.369999999999999e-91 | NR | HEX6182357.1 | 2283092 | g1722 | i0 | 53.9 | 1.57749712973594 | 230 | 106 | 79.2 | 0 | 870 | 181 | 8 | 237 | HEX6182357.1 HNH endonuclease [Pyrinomonadaceae bacterium] | diamond | 1374 | 279 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 32634625 | 32634625 | PRJNA289590_P_NODE_27160_length_167_cov_1.762712_g26936_i0 | PRJNA289590 | 27160 | 167 | 1.762712 | 2.94372904 | Candidatus Sulfotelmatobacter sp. | 2771375 | Bacteria | Bacteria | 81.3 | 2.93e-17 | NR | HVI52293.1 | 2771375 | g26936 | i0 | 69.1 | 2.96407185628743 | 55 | 17 | 98.8 | 0 | 1 | 165 | 117 | 171 | HVI52293.1 class I SAM-dependent methyltransferase [Candidatus Sulfotelmatobacter sp.] | diamond | 495 | 81.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Candidatus Korobacteraceae | Candidatus Sulfotelmatobacter | Candidatus Sulfotelmatobacter sp. | ||
| 32760798 | 32760798 | PRJNA289590_P_NODE_21940_length_189_cov_0.900000_g21716_i0 | PRJNA289590 | 21940 | 189 | 0.9 | 1.701 | Holophaga sp. | 2582906 | Bacteria | Bacteria | 93.6 | 2.21e-20 | NR | MBK8792650.1 | 2582906 | g21716 | i0 | 77 | 6.79365079365079 | 61 | 14 | 96.8 | 0 | 3 | 185 | 491 | 551 | MBK8792650.1 chemotaxis protein CheA [Holophaga sp.] | diamond | 1284 | 93.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Holophaga | Holophaga sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;