RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA289590", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA289590 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29190107 29190107 PRJNA289590_P_NODE_25369_length_171_cov_1.704918_g25145_i0 PRJNA289590 25369 171 1.704918 2.91540978 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.9 3.94e-12   NR HEX2951679.1 2033014 g25145 i0 60.4 2.52631578947368 48 19 84.2 0 167 24 62 109 HEX2951679.1 hypothetical protein [Armatimonadota bacterium] diamond 432 65.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31925054 31925054 PRJNA289590_P_NODE_30017_length_164_cov_0.895652_g29793_i0 PRJNA289590 30017 164 0.895652 1.46886928 Bacteria 2 Bacteria Bacteria 80.5 6.27e-16   NR MBA3724939.1 2033014 g29793 i0 67.3 2.85365853658537 52 17 95.1 0 3 158 128 179 MBA3724939.1 S9 family peptidase [Armatimonadota bacterium] diamond 468 80.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;