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contig_metadata

13 rows where bioproject = "PRJNA289590", tax_clade = "core chlorophytes" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 13 ✖

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 13 ✖

bioproject 1

  • PRJNA289590 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2923473 2923473 PRJNA289590_P_NODE_5783_length_405_cov_7.876404_g5559_i0 PRJNA289590 5783 405 7.876404 31.8994362 Dicloster acuatus 91190 Plants Plants 595 1.4299999999999995e-165   NTclustered gi|725651324|ref|NC_025546.1| 91190 g5559 i0 93.171 99.1555555555556 410 21 100 5 1 405 99217 99624 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 40158 595 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
3610003 3610003 PRJNA289590_P_NODE_8643_length_319_cov_5.251852_g8419_i0 PRJNA289590 8643 319 5.251852 16.75340788 Chlorellaceae 35461 Plants Plants 562 1.12e-155   NTclustered gi|291067107|gb|GQ176862.1| 745287 g8419 i0 98.433 100 319 5 100 0 1 319 88 406 Dictyosphaerium sp. CCAP 222/25 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31900 562 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dictyosphaerium Dictyosphaerium sp. CCAP 222/25
7437321 7437321 PRJNA289590_P_NODE_23966_length_178_cov_2.015504_g23742_i0 PRJNA289590 23966 178 2.015504 3.58759712 Chlorophyta 3041 Plants Plants 329 6.21e-86   NTclustered gi|655359727|gb|KJ616757.1| 3076 g23742 i0 100 100 178 0 100 0 1 178 1615 1438 Chlorella sorokiniana strain LB75 18S ribosomal RNA gene, partial sequence blastn 17800 329 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
9300898 9300898 PRJNA289590_P_NODE_6968_length_362_cov_2.728435_g6744_i0 PRJNA289590 6968 362 2.728435 9.8769347 Parachlorella kessleri 3074 Plants Plants 625 1.6099999999999996e-174   NTclustered gi|254798615|ref|NC_012978.1| 3074 g6744 i0 97.79 115.524861878453 362 8 100 0 1 362 94239 93878 Parachlorella kessleri chloroplast, complete genome blastn 41820 625 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
9987554 9987554 PRJNA289590_P_NODE_25728_length_169_cov_4.633333_g25504_i0 PRJNA289590 25728 169 4.633333 7.83033277 Chlorellaceae 35461 Plants Plants 285 1.28e-72   NTclustered gi|254798615|ref|NC_012978.1| 3074 g25504 i0 97.041 175.201183431953 169 5 100 0 1 169 92107 91939 Parachlorella kessleri chloroplast, complete genome blastn 29609 285 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
15087000 15087000 PRJNA289590_P_NODE_21492_length_191_cov_1.253521_g21268_i0 PRJNA289590 21492 191 1.253521 2.39422511 Chlorellaceae 35461 Plants Plants 303 4.11e-78   NTclustered gi|402770347|gb|JX524866.1| 1227105 g21268 i0 95.312 100.324607329843 192 7 100 2 1 191 40 230 Chlorella cf. vulgaris CHPCL2 large subunit ribosomal RNA gene, partial sequence blastn 19162 303 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella cf. vulgaris CHPCL2
15087002 15087002 PRJNA289590_P_NODE_22152_length_187_cov_3.884058_g21928_i0 PRJNA289590 22152 187 3.884058 7.26318846 root 1 Root_unresolved Root_unresolved 340 3.0499999999999998e-89   NTclustered gi|254798615|ref|NC_012978.1| 3074 g21928 i0 99.465 106 187 1 100 0 1 187 90644 90830 Parachlorella kessleri chloroplast, complete genome blastn 19822 340 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
15087075 15087075 PRJNA289590_P_NODE_7972_length_335_cov_2.881119_g7748_i0 PRJNA289590 7972 335 2.881119 9.65174865 Trebouxiophyceae 75966 Plants Plants 547 3.3099999999999984e-151   NTclustered gi|1169296931|gb|KY364701.1| 63676 g7748 i0 96.131 100.546268656716 336 12 100 1 1 335 4304 3969 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 33683 547 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
16950222 16950222 PRJNA289590_P_NODE_7854_length_338_cov_2.145329_g7630_i0 PRJNA289590 7854 338 2.145329 7.25121202 Chloroidium ellipsoideum 63676 Plants Plants 508 1.58e-139   NTclustered gi|1169296931|gb|KY364701.1| 63676 g7630 i0 93.824 13.9970414201183 340 17 100 4 1 338 5734 5397 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 4731 508 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
19498330 19498330 PRJNA289590_P_NODE_16796_length_219_cov_2.741176_g16572_i0 PRJNA289590 16796 219 2.741176 6.00317544 Dicloster acuatus 91190 Plants Plants 396 7.769999999999997e-106   NTclustered gi|725651324|ref|NC_025546.1| 91190 g16572 i0 99.539 120.059360730594 217 1 99 0 3 219 98974 98758 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 26293 396 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
21461203 21461203 PRJNA289590_P_NODE_30837_length_162_cov_1.610619_g30613_i0 PRJNA289590 30837 162 1.610619 2.60920278 Chlorellaceae 35461 Plants Plants 289 9.44e-74   NTclustered gi|27530003|dbj|AB080309.1| 3074 g30613 i0 98.765 100 162 2 100 0 1 162 899 738 Parachlorella kessleri gene for 18S rRNA, partial sequence blastn 16200 289 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
22736275 22736275 PRJNA289590_P_NODE_26158_length_169_cov_0.866667_g25934_i0 PRJNA289590 26158 169 0.866667 1.46466723 root 1 Root_unresolved Root_unresolved 305 9.81e-79   NTclustered gi|1992615818|gb|MW648643.1| 37433 g25934 i0 100 97.7692307692308 165 0 98 0 5 169 180 16 Stichococcus bacillaris strain TCC145-1-sq1 large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 16523 305 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Stichococcus Stichococcus bacillaris
26775488 26775488 PRJNA289590_P_NODE_24461_length_176_cov_1.204724_g24237_i0 PRJNA289590 24461 176 1.204724 2.12031424 Eukaryota 2759 Plants Plants 80.9 5.3e-16   NR XP_011398664.1 3075 g24237 i0 64.3 3.81818181818182 56 20 95.5 0 169 2 270 325 XP_011398664.1 Dihydrolipoyl dehydrogenase 1, mitochondrial [Auxenochlorella protothecoides] diamond 672 80.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;