contig_metadata
11 rows where bioproject = "PRJNA289590" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1647294 | 1647294 | PRJNA289590_P_NODE_22_length_11072_cov_17.623787_g20_i0 | PRJNA289590 | 22 | 11072 | 17.623787 | 1951.30569664 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 878 | 1.28e-273 | NR | MCA9280974.1 | 2052180 | g20 | i0 | 38.2 | 1.15019869942197 | 1418 | 822 | 37.6 | 19 | 5960 | 1794 | 1 | 1393 | MCA9280974.1 AAA family ATPase [Phycisphaerales bacterium] | diamond | 12735 | 878 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 5475934 | 5475934 | PRJNA289590_P_NODE_20505_length_196_cov_2.068027_g20281_i0 | PRJNA289590 | 20505 | 196 | 2.068027 | 4.05333292 | Oceaniferula spumae | 2979115 | Bacteria | Bacteria | 132 | 2.12e-26 | NTclustered | gi|2753272999|dbj|AP026866.1| | 2979115 | g20281 | i0 | 91.579 | 48.0204081632653 | 95 | 8 | 48 | 0 | 1 | 95 | 833029 | 833123 | Verrucomicrobiaceae bacterium NT6N DNA, complete genome | blastn | 9412 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Oceaniferula | Oceaniferula spumae | |
| 5476120 | 5476120 | PRJNA289590_P_NODE_29125_length_165_cov_0.896552_g28901_i0 | PRJNA289590 | 29125 | 165 | 0.896552 | 1.4793108 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 150 | 4.76e-32 | NTclustered | gi|2814788334|emb|OY762281.2| | 2026772 | g28901 | i0 | 83.333 | 10.133333333333301 | 168 | 22 | 100 | 6 | 1 | 165 | 977513 | 977677 | MAG: Opitutales bacterium isolate 685e4509-010e-4797-9872-a51ee4494a19 genome assembly, chromosome: 1 | blastn | 1672 | 150 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 18224466 | 18224466 | PRJNA289590_P_NODE_6715_length_370_cov_2.246106_g6491_i0 | PRJNA289590 | 6715 | 370 | 2.246106 | 8.3105922 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 169 | 3.3499999999999996e-37 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g6491 | i0 | 90.625 | 61.7540540540541 | 128 | 10 | 34 | 2 | 245 | 370 | 3047506 | 3047379 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 22849 | 169 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 23324821 | 23324821 | PRJNA289590_P_NODE_5199_length_432_cov_2.026110_g4975_i0 | PRJNA289590 | 5199 | 432 | 2.02611 | 8.7527952 | Sedimentisphaerales bacterium | 2813034 | Bacteria | Bacteria | 54.7 | 0.012 | NTclustered | gi|2621703756|emb|OY762711.1| | 2813034 | g4975 | i0 | 94.286 | 0.0810185185185185 | 35 | 2 | 8 | 0 | 25 | 59 | 3671457 | 3671423 | MAG: Sedimentisphaerales bacterium isolate 370b4a7f-3155-49ac-97a8-084c2d75e38e genome assembly, chromosome: 1 | blastn | 35 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaerales bacterium | |||
| 25285525 | 25285525 | PRJNA289590_P_NODE_29660_length_164_cov_0.904348_g29436_i0 | PRJNA289590 | 29660 | 164 | 0.904348 | 1.48313072 | Engelhardtia | 139931 | Bacteria | Bacteria | 195 | 2.15e-45 | NTclustered | gi|1712638177|gb|CP036287.1| | 2528011 | g29436 | i0 | 90.604 | 160.975609756098 | 149 | 10 | 90 | 4 | 1 | 147 | 5247535 | 5247389 | Planctomycetes bacterium Pla133 chromosome, complete genome | blastn | 26400 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Engelhardtia | Engelhardtia mirabilis | |||
| 26915958 | 26915958 | PRJNA289590_P_NODE_22622_length_185_cov_1.529412_g22398_i0 | PRJNA289590 | 22622 | 185 | 1.529412 | 2.8294122 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 70.5 | 2.82e-12 | NR | RYD85970.1 | 2026800 | g22398 | i0 | 53.8 | 0.843243243243243 | 52 | 24 | 84.3 | 0 | 30 | 185 | 515 | 566 | RYD85970.1 MAG: hypothetical protein EOP84_00610 [Verrucomicrobiaceae bacterium] | diamond | 156 | 70.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27358827 | 27358827 | PRJNA289590_P_NODE_4183_length_499_cov_2.033333_g3964_i0 | PRJNA289590 | 4183 | 499 | 2.033333 | 10.14633167 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 139 | 2.4899999999999996e-37 | NR | HEV2695716.1 | 2499141 | g3964 | i0 | 49.7 | 0.907815631262525 | 151 | 72 | 90.2 | 3 | 493 | 44 | 7 | 154 | HEV2695716.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 453 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 29902356 | 29902356 | PRJNA289590_P_NODE_24871_length_174_cov_1.112000_g24647_i0 | PRJNA289590 | 24871 | 174 | 1.112 | 1.93488 | PVC group | 1783257 | Bacteria | Bacteria | 52 | 8.33e-6 | NR | MEI6675535.1 | 2026799 | g24647 | i0 | 50.9 | 5 | 53 | 26 | 91.4 | 0 | 1 | 159 | 2541 | 2593 | MEI6675535.1 cadherin-like beta sandwich domain-containing protein [Verrucomicrobiota bacterium] | diamond | 870 | 52 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32129141 | 32129141 | PRJNA289590_P_NODE_14638_length_236_cov_1.946524_g14414_i0 | PRJNA289590 | 14638 | 236 | 1.946524 | 4.59379664 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 50.8 | 3.83e-5 | NR | MCI0681538.1 | 2052164 | g14414 | i0 | 42.7 | 0.953389830508475 | 75 | 42 | 94.1 | 1 | 14 | 235 | 122 | 196 | MCI0681538.1 hypothetical protein [Gemmataceae bacterium] | diamond | 225 | 50.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 32431475 | 32431475 | PRJNA289590_P_NODE_27019_length_168_cov_0.873950_g26795_i0 | PRJNA289590 | 27019 | 168 | 0.87395 | 1.468236 | Bacteria | 2 | Bacteria | Bacteria | 70.9 | 9.11e-14 | NR | MBL8820106.1 | 37635 | g26795 | i0 | 62.7 | 11.9464285714286 | 51 | 19 | 91.1 | 0 | 3 | 155 | 83 | 133 | MBL8820106.1 GNAT family N-acetyltransferase [Planctomyces sp.] | diamond | 2007 | 71.2 | 0.995786516853933 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;