RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA287283" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

bioproject 1

  • PRJNA287283 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29442285 29442285 PRJNA287283_P_NODE_9170_length_180_cov_0.881890_g8946_i0 PRJNA287283 9170 180 0.88189 1.587402 archaeon 1906665 Archaea Archaea 42.4 0.012   NR RYY83281.1 1906665 g8946 i0 51.4 0.616666666666667 37 17 61.7 1 128 18 24 59 RYY83281.1 MAG: hypothetical protein EON63_11600 [archaeon] diamond 111 42.4 1 Archaea               archaeon
32287467 32287467 PRJNA287283_P_NODE_6619_length_219_cov_0.879518_g6395_i0 PRJNA287283 6619 219 0.879518 1.92614442 archaeon 1906665 Archaea Archaea 73.6 9.34e-14   NR RYH18247.1 1906665 g6395 i0 57.7 1.58904109589041 52 22 71.2 0 20 175 74 125 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 348 73.6 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;