RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where bioproject = "PRJNA287283" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA287283 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3609730 3609730 PRJNA287283_P_NODE_6923_length_210_cov_4.044586_g6699_i0 PRJNA287283 6923 210 4.044586 8.4936306 root 1 Root_unresolved Root_unresolved 388 1.24e-103   NTclustered gi|33334397|gb|AF548083.1| 5074 g6699 i0 100 100 210 0 100 0 1 210 1559 1350 Penicillium brevicompactum strain ALI 319 18S ribosomal RNA gene, partial sequence blastn 21000 388 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium brevicompactum
6161985 6161985 PRJNA287283_P_NODE_5605_length_247_cov_5.427835_g5381_i0 PRJNA287283 5605 247 5.427835 13.40675245 Aspergillaceae 1131492 Fungi Fungi 435 1.9e-117   NTclustered gi|1938233231|gb|MW299281.1| 5065 g5381 i0 98.381 98.9433198380567 247 4 100 0 1 247 909 663 Aspergillus sp. isolate 880356-35--11 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24439 438 0.993150684931507 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus sp.
8711875 8711875 PRJNA287283_P_NODE_7287_length_202_cov_1.838926_g7063_i0 PRJNA287283 7287 202 1.838926 3.71463052 Opisthokonta 33154 Fungi Fungi 374 3.3e-99   NTclustered gi|283827952|gb|EU019262.2| 29917 g7063 i0 100 99.8019801980198 202 0 100 0 1 202 2565 2364 Cladosporium cladosporioides strain CBS 109.21 28S large subunit ribosomal RNA gene, partial sequence blastn 20160 374 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
11850827 11850827 PRJNA287283_P_NODE_3830_length_324_cov_4.874539_g3606_i0 PRJNA287283 3830 324 4.874539 15.79350636 Staninwardia suttonii 407955 Fungi Fungi 394 4.39e-105   NTclustered gi|283827982|gb|DQ923535.2| 407955 g3606 i0 88.72 86.320987654321 328 29 100 8 1 324 3864 3541 Staninwardia suttonii strain CPC 13055 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S large subunit ribosomal RNA gene, partial sequence blastn 27968 394 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Staninwardia Staninwardia suttonii
15086783 15086783 PRJNA287283_P_NODE_7752_length_193_cov_1.414286_g7528_i0 PRJNA287283 7752 193 1.414286 2.72957198 Ascomycota 4890 Fungi Fungi 313 6.91e-81   NTclustered gi|225134683|gb|FJ345355.1| 5076 g7528 i0 95.855 105.974093264249 193 8 100 0 1 193 2985 3177 Penicillium chrysogenum strain ATCC 10108 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20453 313 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium chrysogenum
24011110 24011110 PRJNA287283_P_NODE_8359_length_183_cov_1.984615_g8135_i0 PRJNA287283 8359 183 1.984615 3.63184545 Eukaryota 2759 Fungi Fungi 333 4.97e-87   NTclustered gi|2532687033|gb|OR243761.1| 29917 g8135 i0 99.454 99.9562841530055 183 1 100 0 1 183 3726 3908 Cladosporium cladosporioides strain DSM 104381 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18292 333 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
29663197 29663197 PRJNA287283_P_NODE_10390_length_175_cov_0.918033_g10166_i0 PRJNA287283 10390 175 0.918033 1.60655775 Epicoccum nigrum 105696 Fungi Fungi 66.2 7.75e-11   NR KAG9196832.1 105696 g10166 i0 56.1 1.95428571428571 57 25 97.7 0 174 4 822 878 KAG9196832.1 hypothetical protein G6514_003939 [Epicoccum nigrum] diamond 342 66.2 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Epicoccum Epicoccum nigrum
30074010 30074010 PRJNA287283_P_NODE_8572_length_183_cov_0.861538_g8348_i0 PRJNA287283 8572 183 0.861538 1.57661454 Penicillium macrosclerotiorum 303699 Fungi Fungi 43.9 0.00144   NR XP_056932175.1 303699 g8348 i0 43.6 1.68852459016393 55 25 90.2 1 182 18 13 61 XP_056932175.1 uncharacterized protein N7462_007787 [Penicillium macrosclerotiorum] diamond 309 43.9 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium macrosclerotiorum
30218104 30218104 PRJNA287283_P_NODE_10412_length_175_cov_0.918033_g10188_i0 PRJNA287283 10412 175 0.918033 1.60655775 Cordycipitaceae 474943 Fungi Fungi 56.6 1.57e-7   NR KAJ6782909.1 12942 g10188 i0 73.5 4.04571428571429 34 9 58.3 0 37 138 245 278 KAJ6782909.1 hypothetical protein PWT90_04898 [Aphanocladium album] diamond 708 56.6 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales   Aphanocladium Aphanocladium album
32823811 32823811 PRJNA287283_P_NODE_5980_length_237_cov_0.847826_g5756_i0 PRJNA287283 5980 237 0.847826 2.00934762 Polyplosphaeria fusca 682080 Fungi Fungi 45.1 0.0033   NR KAF2736442.1 682080 g5756 i0 52.9 0.645569620253165 51 19 64.6 2 61 213 121 166 KAF2736442.1 hypothetical protein EJ04DRAFT_159750 [Polyplosphaeria fusca] diamond 153 45.1 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Tetraplosphaeriaceae Polyplosphaeria Polyplosphaeria fusca

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;