RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA287283", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA287283 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27263929 27263929 PRJNA287283_P_NODE_9363_length_179_cov_0.888889_g9139_i0 PRJNA287283 9363 179 0.888889 1.59111131 Adineta steineri 433720 Rotifera other_Eukaryota 116 3.01e-29   NR CAF1514227.1 433720 g9139 i0 94.8 18.4692737430168 58 3 97.2 0 177 4 313 370 CAF1514227.1 unnamed protein product [Adineta steineri] diamond 3306 116 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
27800826 27800826 PRJNA287283_P_NODE_10524_length_175_cov_0.918033_g10300_i0 PRJNA287283 10524 175 0.918033 1.60655775 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 82 2.09e-16   NR CAF0941597.1 1234261 g10300 i0 100 41.3828571428571 34 0 58.3 0 1 102 481 514 CAF0941597.1 unnamed protein product [Didymodactylos carnosus] diamond 7242 82 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
31147985 31147985 PRJNA287283_P_NODE_3195_length_358_cov_1.826230_g2971_i0 PRJNA287283 3195 358 1.82623 6.5379034 Adineta steineri 433720 Rotifera other_Eukaryota 44.3 0.0287   NR CAF1462307.1 433720 g2971 i0 54.5 0.276536312849162 33 15 27.7 0 159 257 107 139 CAF1462307.1 unnamed protein product [Adineta steineri] diamond 99 44.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;