RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA287283", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA287283 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27895301 27895301 PRJNA287283_P_NODE_10425_length_175_cov_0.918033_g10201_i0 PRJNA287283 10425 175 0.918033 1.60655775 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 67.8 2.18e-11   NR KAH9254411.1 1357716 g10201 i0 55.2 1.98857142857143 58 25 99.4 1 174 1 220 276 KAH9254411.1 protein disulfide-isomerase domain [Batrachochytrium salamandrivorans] diamond 348 67.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
29442284 29442284 PRJNA287283_P_NODE_7890_length_191_cov_1.130435_g7666_i0 PRJNA287283 7890 191 1.130435 2.15913085 Phlyctochytrium planicorne 261098 Fungi Fungi 43.5 0.01   NR KAJ3095680.1 261098 g7666 i0 40.5 0.659685863874346 42 25 66 0 165 40 149 190 KAJ3095680.1 hypothetical protein HDU97_006613 [Phlyctochytrium planicorne] diamond 126 43.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
31116560 31116560 PRJNA287283_P_NODE_6675_length_217_cov_1.024390_g6451_i0 PRJNA287283 6675 217 1.02439 2.2229263 Chytriomyces sp. MP71 1882861 Fungi Fungi 62 3.99e-9   NR KAI8616402.1 1882861 g6451 i0 41.7 0.995391705069124 72 41 99.5 1 2 217 161 231 KAI8616402.1 hypothetical protein BC830DRAFT_1118160 [Chytriomyces sp. MP71] diamond 216 62 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces sp. MP71

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;