RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA285816" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA285816 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27516495 27516495 PRJNA285816_S_NODE_11963_length_216_cov_1.772455_g11861_i0 PRJNA285816 11963 216 1.772455 3.8285028 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 77 9.38e-15   NR HET9880576.1 2838779 g11861 i0 55.9 5.80555555555556 68 30 94.4 0 3 206 97 164 HET9880576.1 aldehyde dehydrogenase family protein [Candidatus Binatia bacterium] diamond 1254 77 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29316224 29316224 PRJNA285816_S_NODE_7249_length_262_cov_2.201878_g7147_i0 PRJNA285816 7249 262 2.201878 5.76892036 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 49.7 1.6e-4   NR MDG1399866.1 2838779 g7147 i0 42.9 1.04198473282443 56 30 63 2 251 87 83 137 MDG1399866.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Binatia bacterium] diamond 273 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31780773 31780773 PRJNA285816_S_NODE_477_length_871_cov_4.845499_g424_i0 PRJNA285816 477 871 4.845499 42.20429629 Candidatus Binatus sp. 2811406 Bacteria Bacteria 53.1 7.05e-4   NR HYR96151.1 2811406 g424 i0 34.8 0.809414466130884 141 78 46.2 6 795 394 104 237 HYR96151.1 hypothetical protein [Candidatus Binatus sp.] diamond 705 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;