RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA285816" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA285816 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26694209 26694209 PRJNA285816_S_NODE_9681_length_233_cov_3.342391_g9579_i0 PRJNA285816 9681 233 3.342391 7.78777103 Halalkalibaculum roseum 2709311 Bacteria Bacteria 117 2.08e-29   NR WP_165139739.1 2709311 g9579 i0 72 1.931330472103 75 21 96.6 0 226 2 113 187 WP_165139739.1 cystathionine gamma-synthase [Halalkalibaculum roseum] diamond 450 117 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Halalkalibaculum Halalkalibaculum roseum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;