contig_metadata
20 rows where bioproject = "PRJNA285816" and tax_kingdom = "Methanobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1646737 | 1646737 | PRJNA285816_S_NODE_1742_length_500_cov_5.465632_g1640_i0 | PRJNA285816 | 1742 | 500 | 5.465632 | 27.32816 | Methanosarcinales archaeon | 2250255 | Archaea | Archaea | 225 | 2.78e-69 | NR | RYE83110.1 | 2250255 | g1640 | i0 | 70 | 0.9 | 150 | 45 | 90 | 0 | 8 | 457 | 267 | 416 | RYE83110.1 MAG: translation elongation factor EF-1 subunit alpha, partial [Methanosarcinales archaeon] | diamond | 450 | 225 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinales archaeon | |||
| 9300040 | 9300040 | PRJNA285816_S_NODE_1948_length_477_cov_4.633178_g1846_i0 | PRJNA285816 | 1948 | 477 | 4.633178 | 22.10025906 | Methanobacteriota archaeon | 2026739 | Archaea | Archaea | 133 | 1.58e-35 | NR | RYE97637.1 | 2026739 | g1846 | i0 | 60 | 0.72327044025157206 | 115 | 46 | 72.3 | 0 | 346 | 2 | 18 | 132 | RYE97637.1 MAG: C1 family peptidase, partial [Methanobacteriota archaeon] | diamond | 345 | 133 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 11850528 | 11850528 | PRJNA285816_S_NODE_12370_length_214_cov_0.987879_g12268_i0 | PRJNA285816 | 12370 | 214 | 0.987879 | 2.11406106 | root | 1 | Root_unresolved | Root_unresolved | 79.7 | 1.53e-15 | NR | MFP3945957.1 | 2511821 | g12268 | i0 | 75 | 5.17289719626168 | 52 | 13 | 72.9 | 0 | 157 | 2 | 2 | 53 | MFP3945957.1 molecular chaperone DnaJ [Archaeoglobaceae archaeon] | diamond | 1107 | 79.7 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Archaeoglobi | Archaeoglobales | Archaeoglobaceae | Archaeoglobaceae archaeon | |||
| 13125944 | 13125944 | PRJNA285816_S_NODE_3531_length_360_cov_1.501608_g3429_i0 | PRJNA285816 | 3531 | 360 | 1.501608 | 5.4057888 | Halorussus aquaticus | 2953748 | Archaea | Archaea | 52.8 | 0.034 | NTclustered | gi|2269702782|gb|CP100400.1| | 2953748 | g3429 | i0 | 100 | 0.0777777777777778 | 28 | 0 | 8 | 0 | 295 | 322 | 1465255 | 1465228 | Halorussus aquaticus strain XZYJ18 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Haladaptataceae | Halorussus | Halorussus aquaticus | |
| 26915935 | 26915935 | PRJNA285816_S_NODE_5002_length_307_cov_2.186047_g4900_i0 | PRJNA285816 | 5002 | 307 | 2.186047 | 6.71116429 | Methanocellales archaeon | 2666334 | Archaea | Archaea | 47.4 | 0.0018600000000000001 | NR | MDI6889065.1 | 2666334 | g4900 | i0 | 43.3 | 0.586319218241042 | 60 | 34 | 58.6 | 0 | 87 | 266 | 592 | 651 | MDI6889065.1 DNRLRE domain-containing protein [Methanocellales archaeon] | diamond | 180 | 47.4 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanocellales | Methanocellales archaeon | |||
| 26979195 | 26979195 | PRJNA285816_S_NODE_9022_length_240_cov_1.465969_g8920_i0 | PRJNA285816 | 9022 | 240 | 1.465969 | 3.5183256 | Thermoplasmatota archaeon | 2806419 | Archaea | Archaea | 44.7 | 0.0076 | NR | MEK6987388.1 | 2806419 | g8920 | i0 | 44.2 | 0.65 | 52 | 29 | 65 | 0 | 210 | 55 | 205 | 256 | MEK6987388.1 Ig-like domain-containing protein [Thermoplasmatota archaeon] | diamond | 156 | 44.7 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmatota archaeon | ||||||
| 27706330 | 27706330 | PRJNA285816_S_NODE_12124_length_215_cov_2.186747_g12022_i0 | PRJNA285816 | 12124 | 215 | 2.186747 | 4.70150605 | Thermoplasmata archaeon | 1906666 | Archaea | Archaea | 42.7 | 0.0264 | NR | HYS99079.1 | 1906666 | g12022 | i0 | 42 | 0.697674418604651 | 50 | 29 | 69.8 | 0 | 193 | 44 | 908 | 957 | HYS99079.1 leucine--tRNA ligase [Thermoplasmata archaeon] | diamond | 150 | 42.7 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Thermoplasmata archaeon | |||||
| 27769342 | 27769342 | PRJNA285816_S_NODE_12984_length_210_cov_1.937888_g12882_i0 | PRJNA285816 | 12984 | 210 | 1.937888 | 4.0695648 | Methanosarcinales archaeon | 2250255 | Archaea | Archaea | 42.7 | 0.0244 | NR | RYE85335.1 | 2250255 | g12882 | i0 | 40 | 0.785714285714286 | 55 | 19 | 78.6 | 1 | 46 | 210 | 307 | 347 | RYE85335.1 MAG: hypothetical protein EOO65_00610 [Methanosarcinales archaeon] | diamond | 165 | 42.7 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinales archaeon | |||
| 27832189 | 27832189 | PRJNA285816_S_NODE_28664_length_163_cov_0.912281_g28562_i0 | PRJNA285816 | 28664 | 163 | 0.912281 | 1.48701803 | Methanosarcinales archaeon | 2250255 | Archaea | Archaea | 43.1 | 0.00719 | NR | RYE84401.1 | 2250255 | g28562 | i0 | 45.1 | 0.938650306748466 | 51 | 27 | 92 | 1 | 14 | 163 | 19 | 69 | RYE84401.1 MAG: hypothetical protein EOO65_02325, partial [Methanosarcinales archaeon] | diamond | 153 | 43.1 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanosarcinales | Methanosarcinales archaeon | |||
| 29095351 | 29095351 | PRJNA285816_S_NODE_26048_length_166_cov_1.324786_g25946_i0 | PRJNA285816 | 26048 | 166 | 1.324786 | 2.19914476 | Thermoplasmatota archaeon | 2806419 | Archaea | Archaea | 61.2 | 2.76e-9 | NR | MEF8879996.1 | 2806419 | g25946 | i0 | 58.8 | 0.921686746987952 | 51 | 21 | 92.2 | 0 | 164 | 12 | 142 | 192 | MEF8879996.1 class I SAM-dependent methyltransferase family protein [Thermoplasmatota archaeon] | diamond | 153 | 61.2 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmatota archaeon | ||||||
| 29144771 | 29144771 | PRJNA285816_S_NODE_789_length_702_cov_2.430322_g723_i0 | PRJNA285816 | 789 | 702 | 2.430322 | 17.06086044 | root | 1 | Root_unresolved | Root_unresolved | 67 | 1.04e-8 | NR | WP_116591430.1 | 190975 | g723 | i0 | 35.1 | 1.56837606837607 | 134 | 75 | 53.8 | 5 | 453 | 76 | 167 | 296 | WP_116591430.1 Ig-like domain-containing protein [Methanobrevibacter thaueri] | diamond | 1101 | 67 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter thaueri | |
| 29884749 | 29884749 | PRJNA285816_S_NODE_21031_length_177_cov_1.218750_g20929_i0 | PRJNA285816 | 21031 | 177 | 1.21875 | 2.1571875 | Candidatus Poseidoniales archaeon | 2163009 | Archaea | Archaea | 51.6 | 1.11e-5 | NR | MFL2940038.1 | 2163009 | g20929 | i0 | 42.9 | 0.711864406779661 | 42 | 24 | 71.2 | 0 | 148 | 23 | 372 | 413 | MFL2940038.1 purple acid phosphatase family protein [Candidatus Poseidoniales archaeon] | diamond | 126 | 51.6 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Candidatus Poseidoniia | Candidatus Poseidoniales | Candidatus Poseidoniales archaeon | ||||
| 30250002 | 30250002 | PRJNA285816_S_NODE_17952_length_187_cov_2.978261_g17850_i0 | PRJNA285816 | 17952 | 187 | 2.978261 | 5.56934807 | root | 1 | Root_unresolved | Root_unresolved | 58.2 | 6.39e-8 | NR | OPY44313.1 | 1811687 | g17850 | i0 | 50.8 | 5.85561497326203 | 61 | 29 | 97.9 | 1 | 183 | 1 | 11 | 70 | OPY44313.1 MAG: succinyl-CoA synthetase subunit beta [Methanosaeta sp. PtaU1.Bin028] | diamond | 1095 | 58.2 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanotrichales | Methanotrichaceae | Methanothrix | Methanosaeta sp. PtaU1.Bin028 | |
| 31450757 | 31450757 | PRJNA285816_S_NODE_22076_length_174_cov_1.248000_g21974_i0 | PRJNA285816 | 22076 | 174 | 1.248 | 2.17152 | Stenosarchaea group | 2290931 | Archaea | Archaea | 83.2 | 7.58e-17 | NR | HEX7444945.1 | 90426 | g21974 | i0 | 65.5 | 14.948275862069 | 58 | 20 | 100 | 0 | 1 | 174 | 396 | 453 | HEX7444945.1 ATP citrate lyase citrate-binding domain-containing protein [Methanothrix sp.] | diamond | 2601 | 83.2 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanotrichales | Methanotrichaceae | Methanothrix | Methanothrix sp. | |
| 31780765 | 31780765 | PRJNA285816_S_NODE_17817_length_188_cov_1.122302_g17715_i0 | PRJNA285816 | 17817 | 188 | 1.122302 | 2.10992776 | Methanolinea sp. | 2268143 | Archaea | Archaea | 50.4 | 2.37e-5 | NR | MBP7120145.1 | 2268143 | g17715 | i0 | 47.1 | 0.813829787234043 | 51 | 27 | 81.4 | 0 | 181 | 29 | 38 | 88 | MBP7120145.1 hypothetical protein [Methanolinea sp.] | diamond | 153 | 50.4 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanoregulaceae | Methanolinea | Methanolinea sp. | |
| 31907432 | 31907432 | PRJNA285816_S_NODE_8717_length_243_cov_3.706186_g8615_i0 | PRJNA285816 | 8717 | 243 | 3.706186 | 9.00603198 | Methanobrevibacter sp. | 66852 | Archaea | Archaea | 55.8 | 8.89e-7 | NR | WP_407421068.1 | 66852 | g8615 | i0 | 35.9 | 0.962962962962963 | 78 | 49 | 96.3 | 1 | 241 | 8 | 311 | 387 | WP_407421068.1 C1 family peptidase [Methanobrevibacter sp.] | diamond | 234 | 55.8 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter sp. | |
| 32065574 | 32065574 | PRJNA285816_S_NODE_5318_length_299_cov_1.744000_g5216_i0 | PRJNA285816 | 5318 | 299 | 1.744 | 5.21456 | Methanocaldococcus villosus | 667126 | Archaea | Archaea | 57 | 1.39e-7 | NR | WP_004592618.1 | 667126 | g5216 | i0 | 43 | 0.792642140468227 | 79 | 27 | 79.3 | 2 | 294 | 58 | 80 | 140 | WP_004592618.1 30S ribosomal protein S19e [Methanocaldococcus villosus] | diamond | 237 | 57 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanococci | Methanococcales | Methanocaldococcaceae | Methanocaldococcus | Methanocaldococcus villosus | |
| 32223964 | 32223964 | PRJNA285816_S_NODE_7478_length_259_cov_2.090476_g7376_i0 | PRJNA285816 | 7478 | 259 | 2.090476 | 5.41433284 | Methanobacteriota archaeon | 2026739 | Archaea | Archaea | 68.9 | 9.47e-12 | NR | RYE97637.1 | 2026739 | g7376 | i0 | 58.8 | 0.590733590733591 | 51 | 21 | 59.1 | 0 | 154 | 2 | 20 | 70 | RYE97637.1 MAG: C1 family peptidase, partial [Methanobacteriota archaeon] | diamond | 153 | 68.9 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 32508906 | 32508906 | PRJNA285816_S_NODE_6919_length_267_cov_1.655963_g6817_i0 | PRJNA285816 | 6919 | 267 | 1.655963 | 4.42142121 | Thermoplasmatota archaeon | 2806419 | Archaea | Archaea | 77.4 | 1.73e-15 | NR | HWH08748.1 | 2806419 | g6817 | i0 | 58.1 | 0.831460674157303 | 74 | 26 | 83.1 | 2 | 244 | 23 | 96 | 164 | HWH08748.1 AMP-dependent synthetase [Thermoplasmatota archaeon] | diamond | 222 | 77.4 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmatota archaeon | ||||||
| 32792069 | 32792069 | PRJNA285816_S_NODE_28780_length_163_cov_0.912281_g28678_i0 | PRJNA285816 | 28780 | 163 | 0.912281 | 1.48701803 | Thermoplasmataceae archaeon | 2953047 | Archaea | Archaea | 41.6 | 0.0313 | NR | MFG1460913.1 | 2953047 | g28678 | i0 | 40 | 0.920245398773006 | 50 | 29 | 92 | 1 | 161 | 12 | 159 | 207 | MFG1460913.1 BadF/BadG/BcrA/BcrD ATPase family protein [Thermoplasmataceae archaeon] | diamond | 150 | 41.6 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Thermoplasmatales | Thermoplasmataceae | Thermoplasmataceae archaeon |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;